fgenesh1_pg.sca_82_chr10_2_0000336 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_82_chr10_2_0000336 T390290_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.586 0.872
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.581 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_82_chr10_2_0000336 Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP25174 Atta cephalotes ACEP25174 N
AMAM018479 Anopheles maculatus AMAM018479 N
SINV23766 Solenopsis invicta SINV23766 N
THOM_2912 Trachipleistophora hominis THOM_2912 N
VCUG_02296 Vavraia culicis VCUG_02296 N