Scas_Contig610.9 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig610.9 T390692_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEU3
M01590_2.00 		Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Zhu et al.(2009)
Leu3 		0.596 0.825
LEU3
M07526_2.00 		Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1 		0.596 0.825
LEU3
M08684_2.00 		Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS		 Misc
DeBoer et al.(2011)
YLR451W_781 		0.596 0.825
LEU3
M11482_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_B 		0.596 0.825
LEU3
M11483_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_Q6 		0.596 0.825
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig610.9 Zinc cluster 17 59

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015874 Ailuropoda melanoleuca ENSAMEG00000015874 I 0.000
ENSBTAG00000004151 Bos taurus ENSBTAG00000004151 N 0.000
ENSBTAG00000045616 Bos taurus ENSBTAG00000045616 I 0.000
ENSBTAG00000047279 Bos taurus ENSBTAG00000047279 N 0.000
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.000
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.000
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.000
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.000
ENSOARG00000004633 Ovis aries ENSOARG00000004633 I 0.000
ENSOARG00000005439 Ovis aries ENSOARG00000005439 N 0.000
ENSOARG00000005470 Ovis aries ENSOARG00000005470 N 0.000
ENSOARG00000005509 Ovis aries ENSOARG00000005509 N 0.000
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.000
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.000
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.000
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.000