CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Scas_Contig715.3
(
Saccharomyces castellii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
Scas_Contig715.3
T390719_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Scas_Contig715.3
Zinc cluster
104
146
TSCSHCRQQKIKCDASQNFPAPCSRCQKMALQCQIDPRFKPKK
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces castellii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA019080
Oryza indica
BGIOSGA019080
N
BRADI2G37790
Brachypodium distachyon
BRADI2G37790
N
OBART05G01510
Oryza barthii
OBART05G01510
N
OGLUM05G01550
Oryza glumaepatula
OGLUM05G01550
N
OLONG_019340
Oryza longistaminata
OLONG_019340
N
OMERI05G01600
Oryza meridionalis
OMERI05G01600
N
ONIVA05G01580
Oryza nivara
ONIVA05G01580
N
OPUNC05G01460
Oryza punctata
OPUNC05G01460
N
ORGLA05G0015200
Oryza glaberrima
ORGLA05G0015200
N
ORUFI05G01600
Oryza rufipogon
ORUFI05G01600
N
OS05G0121400
Oryza sativa
OS05G0121400
N
TRIUR3_16972
Triticum urartu
TRIUR3_16972
N