Scas_Contig720.58 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig720.58 T390721_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.573 0.795
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.573 0.795
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.573 0.795
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.573 0.795
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.573 0.795
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.573 0.795
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.573 0.795
KLLA0_D12672g
M11472_2.00 		Kluyveromyces lactis
NTMKCGGAWNWYTKYNVTCCGN
NCGGABNRMARWNWTCCGMKAN		 Transfac
Matys et al.(2006)
F$LAC9_C 		0.551 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig720.58 Zinc cluster 18 56

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_088790 Aspergillus clavatus CADACLAG00008765 N
AFUA_6G07010 Aspergillus fumigatus CADAFUAG00001662 N
BBA_04319 Beauveria bassiana BBA_04319 N
CCM_00123 Cordyceps militaris CCM_00123 N
CCM_02196 Cordyceps militaris CCM_02196 N
CH063_08532 Colletotrichum higginsianum CH063_08532 N
CSUB01_09245 Colletotrichum sublineola CSUB01_09245 N
EURHEDRAFT_398804 Aspergillus ruber EURHEDRAFT_398804 N
GLRG_00869 Colletotrichum graminicola GLRG_00869 N
NFIA_052650 Neosartorya fischeri CADNFIAG00004948 N
PEX1_043550 Penicillium expansum PEX1_043550 I
PMAA_056220 Talaromyces marneffei PMAA_056220 I
PMAA_056220 Penicillium marneffei PMAA_056220 I
PVAR5_2620 Byssochlamys spectabilis PVAR5_2620 I
S40285_01071 Stachybotrys chlorohalonata S40285_01071 N
S40288_05091 Stachybotrys chartarum S40288_05091 N
TRIATDRAFT_295974 Trichoderma atroviride TRIATDRAFT_295974 N
TRIREDRAFT_62199 Trichoderma reesei TRIREDRAFT_62199 N
TRIVIDRAFT_193568 Trichoderma virens TRIVIDRAFT_193568 N
U727_00430522121 Penicillium solitum U727_00430522121 N
VHEMI05064 Torrubiella hemipterigena VHEMI05064 N