23380_YPR009W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23380_YPR009W T390831_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SUT2
M01600_2.00 		Saccharomyces cerevisiae
NNCGGASHNN
NNDSTCCGNN		 PBM
Zhu et al.(2009)
Sut2 		0.683 0.974
SUT2
M08699_2.00 		Saccharomyces cerevisiae
NNNNNYTCGGASTTYNDNND
HNNHNRAASTCCGARNNNNN		 Misc
DeBoer et al.(2011)
YPR009W_869 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23380_YPR009W Zinc cluster 139 155
23380_YPR009W Zinc cluster 211 235

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003932 Aedes aegypti AAEL003932 N
AALB002527 Anopheles albimanus AALB002527 N
AARA006596 Anopheles arabiensis AARA006596 N
AATE012097 Anopheles atroparvus AATE012097 N
ACEP16657 Atta cephalotes ACEP16657 N
ACOM028538 Anopheles coluzzii ACOM028538 N
ADAC002056 Anopheles darlingi ADAC002056 N
ADIR010659 Anopheles dirus ADIR010659 N
AEPI000347 Anopheles epiroticus AEPI000347 N
AFAF005531 Anopheles farauti AFAF005531 N
AGAP003537 Anopheles gambiae AGAP003537 I
AMAM005072 Anopheles maculatus AMAM005072 N
AMEM015214 Anopheles merus AMEM015214 N
AQUA001676 Anopheles quadriannulatus AQUA001676 N
ASTEI09330 Anopheles stephensi ASTEI09330 N
BGIBMGA007530 Bombyx mori BGIBMGA007530 N
Cflo_04979--XP_394394.3_APIME Camponotus floridanus Cflo_04979--XP_394394.3_APIME N
CPIJ009647 Culex quinquefasciatus CPIJ009647 N
CpipJ_CPIJ009647 Culex pipiens CpipJ_CPIJ009647 N
GB47057 Apis mellifera GB47057 N
GF22979 Drosophila ananassae FBgn0099973 N
GH18647 Drosophila grimshawi FBgn0126114 N
GI23126 Drosophila mojavensis FBgn0145853 N
GJ23100 Drosophila virilis FBgn0210202 N
GM16442 Drosophila sechellia FBgn0171357 N
HMEL015189 Heliconius melpomene HMEL015189 N
Hsal_07865--XP_394394.3_APIME Harpegnathos saltator Hsal_07865--XP_394394.3_APIME N
KGM_19333 Danaus plexippus KGM_19333 N
LDEC015482 Leptinotarsa decemlineata LDEC015482 N
MCINX010146 Melitaea cinxia MCINX010146 N
MDOA011489 Musca domestica MDOA011489 N
MESCA008988 Megaselia scalaris MESCA008988 N
NV13850 Nasonia vitripennis NV13850 N
PPAI003518 Phlebotomus papatasi PPAI003518 N
SINV13243 Solenopsis invicta SINV13243 N
TC013842 Tribolium castaneum TC013842 N
ttk Drosophila pseudoobscura FBgn0075017 I
ttk Drosophila melanogaster FBgn0003870 D
YQE_06302 Dendroctonus ponderosae YQE_06302 N