4848_YBR240C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4848_YBR240C T390856_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THI2
M08647_2.00 		Saccharomyces cerevisiae
NMNKNNNBNNBBNNNNCCGH
DCGGNNNNVVNNVNNNMNKN		 Misc
DeBoer et al.(2011)
YBR240C_1449 		0.683 1.000
THI2
M08467_2.00 		Saccharomyces cerevisiae
GGMAACYSWWAGARC
GYTCTWWSRGTTKCC		 COMPILED
Mathelier et al.(2014)
MA0407.1 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4848_YBR240C Zinc cluster 28 66

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1967_YBR240C Saccharomyces paradoxus 1967_YBR240C I 0.683
2117_YBR240C Saccharomyces bayanus 2117_YBR240C I 0.654
AACERI_AaceriAFL033W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL033W I 0.584
AGOS_AFL033W Ashbya gossypii AGOS_AFL033W I 0.584
Ecym_2263 Eremothecium cymbalariae Ecym_2263 I 0.619
KAFR_0G03520 Kazachstania africana KAFR_0G03520 I 0.620
KLLA0_F10373g Kluyveromyces lactis KLLA0_F10373g I 0.611
KLTH0H05720g Lachancea thermotolerans KLTH0H05720g I 0.586
KLTH0H05720g Kluyveromyces thermotolerans KLTH0H05720g I 0.586
Kpol_534p28 Vanderwaltozyma polyspora Kpol_534p28 I 0.586
Kwal_1631 Kluyveromyces waltii Kwal_1631 I 0.604
LALA0_S13e03268g Lachancea lanzarotensis LALA0_S13e03268g I 0.584
NCAS_0H01240 Naumovozyma castellii NCAS_0H01240 I 0.603
NDAI_0F02050 Naumovozyma dairenensis NDAI_0F02050 I 0.604
SAKL0A06072g Lachancea kluyveri SAKL0A06072g I 0.619
Scas_Contig597.4 Saccharomyces castellii Scas_Contig597.4 I 0.603
SKUD_138702 Saccharomyces kudriavzevii SKUD_138702 I 0.683
SU7_0277 Saccharomyces arboricola SU7_0277 I 0.683
TDEL_0B04000 Torulaspora delbrueckii TDEL_0B04000 I 0.601
THI2 Saccharomyces cerevisiae YBR240C D 0.683
ZBAI_04285 Zygosaccharomyces bailii ZBAI_04285 I 0.544
ZBAI_07794 Zygosaccharomyces bailii ZBAI_07794 I 0.544
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I 0.610