CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_10747
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_10747
T391122_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_10747
Zinc cluster
31
69
LACVACRSRKLKCDRIKPACTRCSKLKAECQYPESRRKP
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.000
BGIOSGA037778
Oryza indica
BGIOSGA037778
N
0.000
BRADI4G02060
Brachypodium distachyon
BRADI4G02060
N
0.000
F775_31820
Aegilops tauschii
F775_31820
N
0.000
GRMZM2G114850
Zea mays
GRMZM2G114850
N
0.000
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.000
LPERR01G22040
Leersia perrieri
LPERR01G22040
N
0.000
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.000
LPERR12G15510
Leersia perrieri
LPERR12G15510
N
0.000
MLOC_64240
Hordeum vulgare
MLOC_64240
N
0.000
OB12G25170
Oryza brachyantha
OB12G25170
N
0.000
OBART09G15890
Oryza barthii
OBART09G15890
N
0.000
OBART12G18490
Oryza barthii
OBART12G18490
N
0.000
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.000
OGLUM12G20140
Oryza glumaepatula
OGLUM12G20140
N
0.000
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.000
OMERI12G13180
Oryza meridionalis
OMERI12G13180
N
0.000
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.000
ONIVA12G17390
Oryza nivara
ONIVA12G17390
N
0.000
OPUNC12G16690
Oryza punctata
OPUNC12G16690
N
0.000
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.000
ORGLA12G0157500
Oryza glaberrima
ORGLA12G0157500
N
0.000
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.000
ORUFI12G20640
Oryza rufipogon
ORUFI12G20640
N
0.000
OS09G0509100
Oryza sativa
OS09G0509100
N
0.000
OS12G0610600
Oryza sativa
OS12G0610600
N
0.000
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.000
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.000
Sb03g031000
Sorghum bicolor
Sb03g031000
N
0.000
SELMODRAFT_69130
Selaginella moellendorffii
SELMODRAFT_69130
N
0.000
SELMODRAFT_69131
Selaginella moellendorffii
SELMODRAFT_69131
N
0.000
Si022747m.g
Setaria italica
Si022747m.g
N
0.000
Solyc07g066330.2
Solanum lycopersicum
Solyc07g066330.2
N
0.000
Traes_5AS_E5FD82E36
Triticum aestivum
Traes_5AS_E5FD82E36
N
0.000
Traes_5BS_9F043AE17
Triticum aestivum
Traes_5BS_9F043AE17
N
0.000