CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_20430
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_20430
T391210_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_20430
Zinc cluster
89
128
HACVYCRRSHMTCDLERPCTRCIKRNIGHLCHDEPRDSDS
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G13880
Brachypodium distachyon
BRADI1G13880
N
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
evm.TU.supercontig_2067.2
Carica papaya
evm.TU.supercontig_2067.2
N
evm.TU.supercontig_6.10
Carica papaya
evm.TU.supercontig_6.10
N
F775_31862
Aegilops tauschii
F775_31862
N
GLYMA09G03390
Glycine max
GLYMA09G03390
I
MDP0000223691
Malus domestica
MDP0000223691
N
NBO_29g0016
Nosema bombycis
NBO_29g0016
N
PGSC0003DMG400039707
Solanum tuberosum
PGSC0003DMG400039707
N
TRIUR3_24442
Triticum urartu
TRIUR3_24442
N