PMAA_030540 (Penicillium marneffei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 PMAA_030540 T392012_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_04175
M01361_2.00 		Aspergillus nidulans
NNNCGGRNNN
NNNYCCGNNN		 PBM
Lambert et al.(2019)
pEX0225 		0.586 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_030540.t1 Zinc cluster 25 64

Links

Other Zinc cluster family TFs
Other Penicillium marneffei TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00575 Aegilops tauschii F775_00575 N
F775_02635 Aegilops tauschii F775_02635 N
MLOC_25058 Hordeum vulgare MLOC_25058 N
OBART01G08400 Oryza barthii OBART01G08400 N
ONIVA01G11020 Oryza nivara ONIVA01G11020 N
ORUFI01G09250 Oryza rufipogon ORUFI01G09250 N
TRAES3BF020500010CFD_g Triticum aestivum TRAES3BF020500010CFD_g N
TRAES3BF020500020CFD_g Triticum aestivum TRAES3BF020500020CFD_g N
Traes_2AS_FC3F1F39A Triticum aestivum Traes_2AS_FC3F1F39A N
Traes_2BS_E29F278C4 Triticum aestivum Traes_2BS_E29F278C4 N
Traes_2DS_6584E8617 Triticum aestivum Traes_2DS_6584E8617 N
Traes_3AS_16C02FAE7 Triticum aestivum Traes_3AS_16C02FAE7 N
Traes_3B_30A3E17C6 Triticum aestivum Traes_3B_30A3E17C6 N
Traes_3DS_ECB844CBC Triticum aestivum Traes_3DS_ECB844CBC N
TRIUR3_28399 Triticum urartu TRIUR3_28399 N