XP_002491498.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002491498.1 T392301_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAP1
M00097_2.00 		Saccharomyces cerevisiae
HCGGVNNWH
DWNNBCCGD		 PBM
Badis et al.(2008)
HAP1_2139 		0.565 0.649
HAP1
M00925_2.00 		Saccharomyces cerevisiae
NCGGABWTA
TAWVTCCGN		 PBM
Gordan et al.(2011)
Hap1 		0.565 0.649
HAP1
M07523_2.00 		Saccharomyces cerevisiae
CGGABWTW
WAWVTCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0312.1 		0.565 0.649
HAP1
M08680_2.00 		Saccharomyces cerevisiae
GGMRWTAHCGS
SCGDTAWYKCC		 Misc
DeBoer et al.(2011)
YLR256W_376 		0.565 0.649
HAP1
M11481_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HAP1_B 		0.565 0.649
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002491498.1 Zinc cluster 25 63

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15372_Multiple Saccharomyces mikatae 15372_Multiple I 0.565
15874_YLR256W Saccharomyces paradoxus 15874_YLR256W I 0.565
16896_Multiple Saccharomyces bayanus 16896_Multiple I 0.565
AACERI_AaceriAFR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR117C I 0.565
AGOS_AFR117C Ashbya gossypii AGOS_AFR117C I 0.565
BN7_1978 Wickerhamomyces ciferrii BN7_1978 N 0.547
CAGL0B03421g Candida glabrata CAGL0B03421g I 0.565
CAGL0K05841g Candida glabrata CAGL0K05841g I 0.567
Ecym_2732 Eremothecium cymbalariae Ecym_2732 I 0.606
HAP1 Saccharomyces cerevisiae YLR256W D 0.565
HPODL_05186 Ogataea parapolymorpha HPODL_05186 N 0.556
KAFR_0I02030 Kazachstania africana KAFR_0I02030 I 0.541
KLLA0_F22990g Kluyveromyces lactis KLLA0_F22990g I 0.565
KLTH0H11572g Lachancea thermotolerans KLTH0H11572g I 0.565
KLTH0H11572g Kluyveromyces thermotolerans KLTH0H11572g I 0.565
KNAG_0I01450 Kazachstania naganishii KNAG_0I01450 I 0.541
Kpol_1061p26 Vanderwaltozyma polyspora Kpol_1061p26 I 0.588
Kpol_467p1 Vanderwaltozyma polyspora Kpol_467p1 I 0.541
KUCA_T00003567001 Kuraishia capsulata KUCA_T00003567001 I 0.573
LALA0_S03e08790g Lachancea lanzarotensis LALA0_S03e08790g I 0.581
NCAS_0A08840 Naumovozyma castellii NCAS_0A08840 I 0.541
NDAI_0G05260 Naumovozyma dairenensis NDAI_0G05260 I 0.541
PAS_chr2-1_0582 Komagataella pastoris PAS_chr2-1_0582 I 0.683
SAKL0D07898g Lachancea kluyveri SAKL0D07898g I 0.565
Scas_Contig573.4 Saccharomyces castellii Scas_Contig573.4 I 0.541
TBLA_0A01210 Tetrapisispora blattae TBLA_0A01210 I 0.565
TBLA_0C01120 Tetrapisispora blattae TBLA_0C01120 I 0.541
TDEL_0B06260 Torulaspora delbrueckii TDEL_0B06260 I 0.541
TPHA_0B03630 Tetrapisispora phaffii TPHA_0B03630 I 0.541
TPHA_0O00600 Tetrapisispora phaffii TPHA_0O00600 I 0.565
ZBAI_03458 Zygosaccharomyces bailii ZBAI_03458 I 0.565
ZBAI_08458 Zygosaccharomyces bailii ZBAI_08458 I 0.565
ZYRO0E05412g Zygosaccharomyces rouxii ZYRO0E05412g I 0.565