CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400003357
(
Solanum tuberosum
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04684 (BAF1_ABF1)
IPR006774
PGSC0003DMG400003357
T000061_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400008659
ABF1
20
161
YGAPYHANQVAGPSPPMSAGAQTVGLPASSGQMTQHQLAYQHIHQQQQQQLQQQLQSFWGNQYQEIEHINDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARASEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRT
PGSC0003DMT400008660
ABF1
20
161
YGAPYHANQVAGPSPPMSAGAQTVGLPASSGQMTQHQLAYQHIHQQQQQQLQQQLQSFWGNQYQEIEHINDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARASEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRT
PGSC0003DMT400008661
ABF1
20
161
YGAPYHANQVAGPSPPMSAGAQTVGLPASSGQMTQHQLAYQHIHQQQQQQLQQQLQSFWGNQYQEIEHINDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARASEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRT
PGSC0003DMT400008662
ABF1
20
161
YGAPYHANQVAGPSPPMSAGAQTVGLPASSGQMTQHQLAYQHIHQQQQQQLQQQLQSFWGNQYQEIEHINDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARASEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRT
Links
Other
ABF1
family TFs
Other
Solanum tuberosum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KLLA0_F18524g
Kluyveromyces lactis
KLLA0_F18524g
N
TBLA_0I01970
Tetrapisispora blattae
TBLA_0I01970
N
TPHA_0A03980
Tetrapisispora phaffii
TPHA_0A03980
N
TDEL_0D03430
Torulaspora delbrueckii
TDEL_0D03430
N
ZBAI_09753
Zygosaccharomyces bailii
ZBAI_09753
N