AMTR_s00025p00249140 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00025p00249140 T000360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.810 0.922
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.754 0.824
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.754 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN12693 AP2 5 56

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012673 Ailuropoda melanoleuca ENSAMEG00000012673 I
RELB Anolis carolinensis ENSACAG00000004079 I
RELB Bos taurus ENSBTAG00000038428 I
RELB Callithrix jacchus ENSCJAG00000012991 I
RELB Canis familiaris ENSCAFG00000004597 I
RELB Cavia porcellus ENSCPOG00000010273 I
ENSCSAG00000003233 Chlorocebus sabaeus ENSCSAG00000003233 I
ENSDNOG00000032456 Dasypus novemcinctus ENSDNOG00000032456 I
Relb Dipodomys ordii ENSDORG00000003448 I
RELB Equus caballus ENSECAG00000020898 I
RELB Felis catus ENSFCAG00000025715 I
RELB Gorilla gorilla ENSGGOG00000003380 I
RELB Homo sapiens ENSG00000104856 D
ENSSTOG00000009056 Ictidomys tridecemlineatus ENSSTOG00000009056 I
RELB Macaca mulatta ENSMMUG00000014153 I
RELB Microcebus murinus ENSMICG00000006991 I
RELB Monodelphis domestica ENSMODG00000020855 I
Relb Mus musculus ENSMUSG00000002983 D
RELB Myotis lucifugus ENSMLUG00000006593 I
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I
Ogr08766 Ophisaurus gracilis Ogr08766 I
RELB Otolemur garnettii ENSOGAG00000012777 I
ENSOARG00000009545 Ovis aries ENSOARG00000009545 I
RELB Pan troglodytes ENSPTRG00000011133 I
ENSPANG00000007219 Papio anubis ENSPANG00000007219 I
ENSPSIG00000012895 Pelodiscus sinensis ENSPSIG00000012895 I
Pvit_18473 Pogona vitticeps Pvit_18473 I
ENSPPYG00000010103 Pongo abelii ENSPPYG00000010103 I
RELB Procavia capensis ENSPCAG00000010787 I
RELB Pteropus vampyrus ENSPVAG00000015952 I
Relb Rattus norvegicus ENSRNOG00000033235 I
RELB Tursiops truncatus ENSTTRG00000015217 I