AMTR_s00026p00180130 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00026p00180130 T000361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.680 0.706
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.680 0.706
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.680 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.680 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN10411 AP2 107 158

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGI_10023724 Crassostrea gigas CGI_10023724 N
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N
ENSGGOG00000026945 Gorilla gorilla ENSGGOG00000026945 N
HelroG157878 Helobdella robusta HelroG157878 N
TTAC_0000939701 Hydatigera taeniaeformis TTAC_0000939701 N
HNAJ_0000227501 Hymenolepis nana HNAJ_0000227501 N
ISCW017350 Ixodes scapularis ISCW017350 N
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N
TASK_0000795701 Taenia asiatica TASK_0000795701 N
TsM_000746700 Taenia solium TsM_000746700 N