CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA002708
(
Oryza indica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BGIOSGA002708
T000548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA002708-PA
AP2
115
165
TCYRGVRLRKWGKWAAEIRNPFTGHREWLGTFDTADAASAAYQSASRNFAE
Links
Other
AP2
family TFs
Other
Oryza indica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_1003053
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1003053
N
0.000
LjSGA_065309.1
Lotus japonicus
LjSGA_065309.1
N
0.000
MDP0000403071
Malus domestica
MDP0000403071
N
0.000
OLONG_019147
Oryza longistaminata
OLONG_019147
N
0.000
ONIVA11G01720
Oryza nivara
ONIVA11G01720
N
0.000
ORUFI07G14800
Oryza rufipogon
ORUFI07G14800
N
0.000
PGSC0003DMG400028125
Solanum tuberosum
PGSC0003DMG400028125
I
0.000
Traes_2AS_239CDF865
Triticum aestivum
Traes_2AS_239CDF865
N
0.000