BGIOSGA005542 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA005542 T000560_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.782 0.960
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.768 0.920
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.749 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA005542-PA AP2 32 83

Links

Other AP2 family TFs
Other Oryza indica TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09210 Acanthocheilonema viteae nAv.1.0.1.g09210 N
ANCCAN_17450 Ancylostoma caninum ANCCAN_17450 N
ANCCEY_13601 Ancylostoma ceylanicum ANCCEY_13601 N
ACAC_0000097901 Angiostrongylus cantonensis ACAC_0000097901 N
ACOC_0001046901 Angiostrongylus costaricensis ACOC_0001046901 N
ASIM_0001667401 Anisakis simplex ASIM_0001667401 N
ALUE_0001232101 Ascaris lumbricoides ALUE_0001232101 N
Bm2568 Brugia malayi Bm2568 N
BXY_0200600 Bursaphelenchus xylophilus BXY_0200600 N
DICVIV_12287 Dictyocaulus viviparus DICVIV_12287 N
nDi.2.2.2.g11569 Dirofilaria immitis nDi.2.2.2.g11569 N
EEL_0000689801 Elaeophora elaphi EEL_0000689801 N
GPUH_0000001601 Gongylonema pulchrum GPUH_0000001601 N
HPLM_0000516101 Haemonchus placei HPLM_0000516101 N
Hba_18606 Heterorhabditis bacteriophora Hba_18606 N
LOAG_13016 Loa loa LOAG_13016 N
OESDEN_06978 Oesophagostomum dentatum OESDEN_06978 N
OESDEN_10792 Oesophagostomum dentatum OESDEN_10792 N
OESDEN_21747 Oesophagostomum dentatum OESDEN_21747 N
OFLC_0001267501 Onchocerca flexuosa OFLC_0001267501 N
nOo.2.0.1.g06549 Onchocerca ochengi nOo.2.0.1.g06549 N
WBGene00242644 Onchocerca volvulus WBGene00242644 N
PEQ_0000726101 Parascaris equorum PEQ_0000726101 N
PTRK_0001597500 Parastrongyloides trichosuri PTRK_0001597500 N
scaffold63-EXSNAP2012.11 Pristionchus exspectatus scaffold63-EXSNAP2012.11 N
PPA09870 Pristionchus pacificus PPA09870 N
L596_g1000 Steinernema carpocapsae L596_g1000 N
L889_g10736 Steinernema feltiae L889_g10736 N
L893_g12635 Steinernema glaseri L893_g12635 N
L892_g22878 Steinernema scapterisci L892_g22878 N
SPAL_0001233000 Strongyloides papillosus SPAL_0001233000 N
SVE_0753100 Strongyloides venezuelensis SVE_0753100 N
TELCIR_15174 Teladorsagia circumcincta TELCIR_15174 N
TCLT_0000244001 Thelazia callipaeda TCLT_0000244001 N
WUBG_05396 Wuchereria bancrofti WUBG_05396 N