Bo5g123710 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo5g123710 T000849_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-3
M01050_2.00 		Arabidopsis thaliana
CGCCGCCR
YGGCGGCG		 PBM
Sullivan et al.(2014)
pTH8811 		0.794 0.920
RAP2-3
M00847_2.00 		Arabidopsis thaliana
NMGCCGCCDN
NHGGCGGCKN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.3 		0.794 0.920
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.764 0.780
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.756 0.840
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.731 0.800
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.730 0.780
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.719 0.740
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.719 0.740
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.695 0.680
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.695 0.680
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.695 0.680
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.692 0.700
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.689 0.640
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.689 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g123710.1 AP2 125 176

Links

Other AP2 family TFs
Other Brassica oleracea TFs

576 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001448 Acyrthosiphon pisum ACYPI001448 I
AALB010655 Anopheles albimanus AALB010655 I
AARA000771 Anopheles arabiensis AARA000771 I
ACHR006076 Anopheles christyi ACHR006076 I
ACUA022223 Anopheles culicifacies ACUA022223 I
ADIR004364 Anopheles dirus ADIR004364 I
AEPI000695 Anopheles epiroticus AEPI000695 I
AFUN009694 Anopheles funestus AFUN009694 I
AMEM016167 Anopheles merus AMEM016167 I
AMIN004405 Anopheles minimus AMIN004405 I
AQUA008654 Anopheles quadriannulatus AQUA008654 I
GB40416 Apis mellifera GB40416 I
ENSAMXG00000025610 Astyanax mexicanus ENSAMXG00000025610 I
ENSAMXG00000024993 Astyanax mexicanus ENSAMXG00000024993 I
ACEP23430 Atta cephalotes ACEP23430 I
Cflo_04586--NP_001011637.1_APIME Camponotus floridanus Cflo_04586--NP_001011637.1_APIME I
CapteG154829 Capitella teleta CapteG154829 I
csin110283 Clonorchis sinensis csin110283 I
CGI_10013641 Crassostrea gigas CGI_10013641 I
CGI_10006631 Crassostrea gigas CGI_10006631 I
CpipJ_CPIJ012828 Culex pipiens CpipJ_CPIJ012828 I
CpipJ_CPIJ012827 Culex pipiens CpipJ_CPIJ012827 I
CPIJ012828 Culex quinquefasciatus CPIJ012828 I
CPIJ012827 Culex quinquefasciatus CPIJ012827 I
twist2 Danio rerio ENSDARG00000078266 I
twist1b Danio rerio ENSDARG00000076010 I
twist1a Danio rerio ENSDARG00000030402 I
DILT_0001206901 Diphyllobothrium latum DILT_0001206901 I
GF13559 Drosophila ananassae FBgn0090588 I
twi Drosophila erecta FBgn0064598 I
GH20971 Drosophila grimshawi FBgn0128433 I
twi Drosophila melanogaster FBgn0003900 D
GI21307 Drosophila mojavensis FBgn0144037 I
GL11229 Drosophila persimilis FBgn0148838 I
twi Drosophila pseudoobscura FBgn0243556 I
GM15978 Drosophila sechellia FBgn0170894 I
twi Drosophila simulans FBgn0016355 I
twi Drosophila virilis FBgn0020065 I
GK19547 Drosophila willistoni FBgn0221545 I
twi Drosophila yakuba FBgn0084444 I
ECANG7_02703 Echinococcus canadensis ECANG7_02703 I
EmuJ_000663800 Echinococcus multilocularis EmuJ_000663800 I
ECPE_0000551801 Echinostoma caproni ECPE_0000551801 I
D915_00417 Fasciola hepatica D915_00417 I
ENSFALG00000015081 Ficedula albicollis ENSFALG00000015081 I
twist2 Gasterosteus aculeatus ENSGACG00000002227 I
TWIST1 Gasterosteus aculeatus ENSGACG00000006420 I
Gfo_R014393 Geospiza fortis Gfo_R014393 I
Hsal_01530--NP_001011637.1_APIME Harpegnathos saltator Hsal_01530--NP_001011637.1_APIME I
HDID_0001003601 Hymenolepis diminuta HDID_0001003601 I
HmN_000912800 Hymenolepis microstoma HmN_000912800 I
HNAJ_0000179601 Hymenolepis nana HNAJ_0000179601 I
ISCW009433 Ixodes scapularis ISCW009433 I
LCUP006189 Lucilia cuprina LCUP006189 I
MCOS_0000111401 Mesocestoides corti MCOS_0000111401 I
MDOA005417 Musca domestica MDOA005417 I
NV10141 Nasonia vitripennis NV10141 I
ENSONIG00000020502 Oreochromis niloticus ENSONIG00000020502 I
ENSONIG00000020610 Oreochromis niloticus ENSONIG00000020610 I
ENSONIG00000021342 Oreochromis niloticus ENSONIG00000021342 I
twist1 Oryzias latipes ENSORLG00000007251 I
twist2 Oryzias latipes ENSORLG00000018096 I
ENSPMAG00000003993 Petromyzon marinus ENSPMAG00000003993 I
PPAI007734 Phlebotomus papatasi PPAI007734 N
ENSPFOG00000020053 Poecilia formosa ENSPFOG00000020053 I
ENSPFOG00000019887 Poecilia formosa ENSPFOG00000019887 I
ENSPFOG00000020314 Poecilia formosa ENSPFOG00000020314 I
PXEA_0000232401 Protopolystoma xenopodis PXEA_0000232401 I
Sakowv30001350m.g Saccoglossus kowalevskii Sakowv30001350m.g I
SSLN_0000059301 Schistocephalus solidus SSLN_0000059301 I
SCUD_0002255501 Schistosoma curassoni SCUD_0002255501 I
A_07561 Schistosoma haematobium A_07561 I
Sjc_0042560 Schistosoma japonicum Sjc_0042560 I
Smp_203270 Schistosoma mansoni Smp_203270 I
SPU_030059 Strongylocentrotus purpuratus SPU_030059 I
TASK_0000180901 Taenia asiatica TASK_0000180901 I
TsM_000716700 Taenia solium TsM_000716700 I
ENSTGUG00000003756 Taeniopygia guttata ENSTGUG00000003756 I
twist2 Takifugu rubripes ENSTRUG00000006090 I
twist1 Takifugu rubripes ENSTRUG00000015797 I
twist2 Tetraodon nigroviridis ENSTNIG00000001562 I
TWIST1 Tetraodon nigroviridis ENSTNIG00000001678 I
twist1b Tetraodon nigroviridis ENSTNIG00000018440 I
D917_00468 Trichinella nativa D917_00468 I
EFV58362 Trichinella spiralis EFV58362 I
TRE_0001282801 Trichobilharzia regenti TRE_0001282801 I
TMUE_s0004013100 Trichuris muris TMUE_s0004013100 I
D918_07072 Trichuris suis D918_07072 I
TTRE_0000397101 Trichuris trichiura TTRE_0000397101 I
twist1.S Xenopus laevis XB-GENE-865309 I
twist1.L Xenopus laevis XB-GENE-6255840 I
twist1 Xenopus tropicalis XB-GENE-479802 I
ENSXMAG00000019787 Xiphophorus maculatus ENSXMAG00000019787 I
ENSXMAG00000020062 Xiphophorus maculatus ENSXMAG00000020062 I
ENSXMAG00000020142 Xiphophorus maculatus ENSXMAG00000020142 I