Bra004873 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra004873 T001011_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.833 0.979
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.833 0.979
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.833 0.979
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.723 0.792
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.723 0.792
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.718 0.771
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.706 0.771
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.706 0.771
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.706 0.771
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.698 0.667
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.685 0.688
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.685 0.688
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004873.1-P AP2 108 159

Links

Other AP2 family TFs
Other Brassica rapa TFs

446 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007556 Ailuropoda melanoleuca ENSAMEG00000007556 N
Alligator_sinensis_CCG011037.1 Alligator sinensis Alligator_sinensis_CCG011037.1 N
ZBTB8A Anolis carolinensis ENSACAG00000004819 N
Afo_R013969 Aptenodytes forsteri Afo_R013969 N
ENSBTAP00000024222-D1 Bos grunniens ENSBTAP00000024222-D1 N
ZBTB8A Bos taurus ENSBTAG00000018199 N
Brh_R002265 Buceros rhinoceros Brh_R002265 N
ZBTB8A Callithrix jacchus ENSCJAG00000001003 N
Aan_R015482 Calypte anna Aan_R015482 N
ZBTB8A Canis familiaris ENSCAFG00000023779 N
ENSCPOG00000020832 Cavia porcellus ENSCPOG00000020832 N
ENSCSAG00000001058 Chlorocebus sabaeus ENSCSAG00000001058 N
ZBTB8A Dasypus novemcinctus ENSDNOG00000032935 N
Zbtb8a Dipodomys ordii ENSDORG00000007027 N
ZBTB8A Equus caballus ENSECAG00000023392 N
ZBTB8A Felis catus ENSFCAG00000027580 N
ENSFALG00000000603 Ficedula albicollis ENSFALG00000000603 N
ENSGALG00000003420 Gallus gallus ENSGALG00000003420 N
Gfo_R011646 Geospiza fortis Gfo_R011646 N
ZBTB8A Homo sapiens ENSG00000160062 N
ENSSTOG00000024103 Ictidomys tridecemlineatus ENSSTOG00000024103 N
ZBTB8A Loxodonta africana ENSLAFG00000031979 N
ENSP00000362609 Macaca fascicularis ENSP00000362609 N
ENSMEUG00000013710 Macropus eugenii ENSMEUG00000013710 N
ZBTB8A Meleagris gallopavo ENSMGAG00000004949 N
ZBTB8A Monodelphis domestica ENSMODG00000017424 N
ENSMPUG00000015223 Mustela putorius furo ENSMPUG00000015223 N
Zbtb8a Mus musculus ENSMUSG00000028807 N
Myotis_brandtii_ZBTB8A_10012393 Myotis brandtii Myotis_brandtii_ZBTB8A_10012393 N
ZBTB8A Myotis lucifugus ENSMLUG00000023002 N
ENSNLEG00000002769 Nomascus leucogenys ENSNLEG00000002769 N
ZBTB8A Ochotona princeps ENSOPRG00000018275 N
Ogr05994 Ophisaurus gracilis Ogr05994 N
ZBTB8A Ornithorhynchus anatinus ENSOANG00000001191 N
ZBTB8A Oryctolagus cuniculus ENSOCUG00000021621 N
ZBTB8A Otolemur garnettii ENSOGAG00000028328 N
ENSOARG00000020930 Ovis aries ENSOARG00000020930 N
ZBTB8A Pan troglodytes ENSPTRG00000034505 N
ENSPANG00000019096 Papio anubis ENSPANG00000019096 N
ENSPSIG00000008472 Pelodiscus sinensis ENSPSIG00000008472 N
Pvit_17720 Pogona vitticeps Pvit_17720 N
ENSPPYG00000001590 Pongo abelii ENSPPYG00000001590 N
ZBTB8A Procavia capensis ENSPCAG00000013857 N
ZBTB8A Pteropus vampyrus ENSPVAG00000010978 N
Zbtb8a Rattus norvegicus ENSRNOG00000008300 N
ENSSHAG00000010423 Sarcophilus harrisii ENSSHAG00000010423 N
ZBTB8A Sus scrofa ENSSSCG00000021457 N
ZBTB8A Taeniopygia guttata ENSTGUG00000001373 N
ENSTSYG00000009437 Tarsius syrichta ENSTSYG00000009437 N
ZBTB8A Tursiops truncatus ENSTTRG00000014967 N
Tal_R009236 Tyto alba Tal_R009236 N
ZBTB8A Vicugna pacos ENSVPAG00000011873 N