Bra023070 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra023070 T001146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.745 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra023070.1-P AP2 13 65

Links

Other AP2 family TFs
Other Brassica rapa TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000861 Ailuropoda melanoleuca ENSAMEG00000000861 N 0.000
Alligator_sinensis_CCG002326.1 Alligator sinensis Alligator_sinensis_CCG002326.1 N 0.000
ENSAPLG00000009042 Anas platyrhynchos ENSAPLG00000009042 N 0.000
DMTF1 Anolis carolinensis ENSACAG00000001448 N 0.000
Afo_R015331 Aptenodytes forsteri Afo_R015331 N 0.000
DMTF1 Bos taurus ENSBTAG00000020878 N 0.000
Brh_R003353 Buceros rhinoceros Brh_R003353 N 0.000
DMTF1 Callithrix jacchus ENSCJAG00000014730 N 0.000
Aan_R000489 Calypte anna Aan_R000489 N 0.000
DMTF1 Canis familiaris ENSCAFG00000001819 N 0.000
ENSCSAG00000012356 Chlorocebus sabaeus ENSCSAG00000012356 N 0.000
CGI_10017105 Crassostrea gigas CGI_10017105 N 0.000
dmtf1 Danio rerio ENSDARG00000025824 N 0.000
ENSDORG00000010983 Dipodomys ordii ENSDORG00000010983 N 0.000
DMTF1 Echinops telfairi ENSETEG00000018444 N 0.000
DMTF1 Equus caballus ENSECAG00000020746 N 0.000
DMTF1 Erinaceus europaeus ENSEEUG00000012844 N 0.000
DMTF1 Felis catus ENSFCAG00000013756 N 0.000
ENSFALG00000001933 Ficedula albicollis ENSFALG00000001933 N 0.000
ENSGALG00000006628 Gallus gallus ENSGALG00000006628 N 0.000
Gfo_R011500 Geospiza fortis Gfo_R011500 N 0.000
DMTF1 Gorilla gorilla ENSGGOG00000002781 N 0.000
DMTF1 Homo sapiens ENSG00000135164 N 0.000
ENSSTOG00000010351 Ictidomys tridecemlineatus ENSSTOG00000010351 N 0.000
ENSLACG00000013017 Latimeria chalumnae ENSLACG00000013017 N 0.000
DMTF1 Loxodonta africana ENSLAFG00000004637 N 0.000
ENSP00000332171 Macaca fascicularis ENSP00000332171 N 0.000
DMTF1 Macaca mulatta ENSMMUG00000010781 N 0.000
DMTF1 Meleagris gallopavo ENSMGAG00000005151 N 0.000
DMTF1 Monodelphis domestica ENSMODG00000016953 N 0.000
ENSMPUG00000018305 Mustela putorius furo ENSMPUG00000018305 N 0.000
Dmtf1 Mus musculus ENSMUSG00000042508 N 0.000
Myotis_brandtii_DMTF1_10006608 Myotis brandtii Myotis_brandtii_DMTF1_10006608 N 0.000
DMTF1 Myotis lucifugus ENSMLUG00000017083 N 0.000
NEMVEDRAFT_v1g22981 Nematostella vectensis NEMVEDRAFT_v1g22981 N 0.000
ENSNLEG00000014921 Nomascus leucogenys ENSNLEG00000014921 N 0.000
Ogr14649 Ophisaurus gracilis Ogr14649 N 0.000
ENSONIG00000009949 Oreochromis niloticus ENSONIG00000009949 N 0.000
DMTF1 Ornithorhynchus anatinus ENSOANG00000015391 N 0.000
DMTF1 Oryctolagus cuniculus ENSOCUG00000009179 N 0.000
DMTF1 Otolemur garnettii ENSOGAG00000000022 N 0.000
ENSOARG00000014574 Ovis aries ENSOARG00000014574 N 0.000
DMTF1 Pan troglodytes ENSPTRG00000019364 N 0.000
ENSPANG00000011083 Papio anubis ENSPANG00000011083 N 0.000
ENSPSIG00000016443 Pelodiscus sinensis ENSPSIG00000016443 N 0.000
ENSPMAG00000004094 Petromyzon marinus ENSPMAG00000004094 N 0.000
Pvit_19395 Pogona vitticeps Pvit_19395 N 0.000
ENSPPYG00000017849 Pongo abelii ENSPPYG00000017849 N 0.000
DMTF1 Procavia capensis ENSPCAG00000014639 N 0.000
DMTF1 Pteropus vampyrus ENSPVAG00000007410 N 0.000
Dmtf1 Rattus norvegicus ENSRNOG00000005908 N 0.000
Sakowv30027682m.g Saccoglossus kowalevskii Sakowv30027682m.g N 0.000
ENSSHAG00000018587 Sarcophilus harrisii ENSSHAG00000018587 N 0.000
DMTF1 Sorex araneus ENSSARG00000002410 N 0.000
SMAR006666 Strigamia maritima SMAR006666 N 0.000
DMTF1 Sus scrofa ENSSSCG00000015393 N 0.000
DMTF1 Taeniopygia guttata ENSTGUG00000002365 N 0.000
dmtf1 Tetraodon nigroviridis ENSTNIG00000018722 N 0.000
DMTF1 Tursiops truncatus ENSTTRG00000006785 N 0.000
Tal_R002829 Tyto alba Tal_R002829 N 0.000
DMTF1 Vicugna pacos ENSVPAG00000009890 N 0.000
XP_002935299 Xenopus tropicalis XP_002935299 N 0.000