BRADI3G58980 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G58980 T001351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.798 0.900
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.798 0.900
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.795 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G58980.1 AP2 154 205

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

426 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07666 Aegilops tauschii F775_07666 N
F775_30001 Aegilops tauschii F775_30001 I
AMTR_s00024p00195160 Amborella trichopoda AMTR_s00024p00195160 I
AMTR_s00048p00192930 Amborella trichopoda AMTR_s00048p00192930 I
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N
Aquca_014_00766 Aquilegia coerulea Aquca_014_00766 N
Aquca_020_00519 Aquilegia coerulea Aquca_020_00519 N
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N
Al_scaffold_0003_1456 Arabidopsis lyrata Al_scaffold_0003_1456 N
HAP2A Arabidopsis lyrata Al_scaffold_0006_1178 N
fgenesh1_pg.C_scaffold_286000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_286000001 N
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N
NFYA9 Arabidopsis thaliana AT3G20910 N
NFYA1 Arabidopsis thaliana AT5G12840 N
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N
Bostr.28625s0302 Boechera stricta Bostr.28625s0302 N
Bostr.2902s0020 Boechera stricta Bostr.2902s0020 N
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I
BRADI1G72960 Brachypodium distachyon BRADI1G72960 I
BRADI4G01820 Brachypodium distachyon BRADI4G01820 N
Bo1g134650 Brassica oleracea Bo1g134650 N
Bo3g008860 Brassica oleracea Bo3g008860 N
Bo5g105110 Brassica oleracea Bo5g105110 I
Bra001806 Brassica rapa Bra001806 N
Bra006165 Brassica rapa Bra006165 N
Bra021527 Brassica rapa Bra021527 N
Bra023913 Brassica rapa Bra023913 N
Bra031242 Brassica rapa Bra031242 I
PK00926.1 Cannabis sativa PK00926.1 N
PK11147.1 Cannabis sativa PK11147.1 I
PK21261.1 Cannabis sativa PK21261.1 I
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N
Cagra.1535s0021 Capsella grandiflora Cagra.1535s0021 N
Carubv10001701m.g Capsella rubella Carubv10001701m.g N
Carubv10014289m.g Capsella rubella Carubv10014289m.g N
Carubv10014390m.g Capsella rubella Carubv10014390m.g N
evm.TU.supercontig_125.6 Carica papaya evm.TU.supercontig_125.6 I
evm.TU.supercontig_20.45 Carica papaya evm.TU.supercontig_20.45 N
evm.TU.supercontig_84.49 Carica papaya evm.TU.supercontig_84.49 I
fgeneshCV_pg.C_scaffold_3000204 Chlorella vulgaris fgeneshCV_pg.C_scaffold_3000204 I
Ca_02713 Cicer arietinum Ca_02713 N
Ca_07995 Cicer arietinum Ca_07995 N
Ca_10039 Cicer arietinum Ca_10039 N
Ca_15574 Cicer arietinum Ca_15574 I
Ca_20250 Cicer arietinum Ca_20250 N
Cla008690 Citrullus lanatus Cla008690 N
Cla009990 Citrullus lanatus Cla009990 N
Cla015490 Citrullus lanatus Cla015490 I
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I
Ciclev10015808m.g Citrus clementina Ciclev10015808m.g I
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N
Ciclev10026020m.g Citrus clementina Ciclev10026020m.g I
Ciclev10032207m.g Citrus clementina Ciclev10032207m.g N
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I
orange1.1g019036m.g Citrus sinensis orange1.1g019036m.g I
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N
orange1.1g019782m.g Citrus sinensis orange1.1g019782m.g I
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N
Genemark1.1758_g Coccomyxa subellipsoidea C169 Genemark1.1758_g I
Cucsa.048230 Cucumis sativus Cucsa.048230 N
Cucsa.124180 Cucumis sativus Cucsa.124180 N
Cucsa.127910 Cucumis sativus Cucsa.127910 I
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I
Eucgr.G03377 Eucalyptus grandis Eucgr.G03377 N
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N
Thhalv10021240m.g Eutrema salsugineum Thhalv10021240m.g I
Thhalv10021250m.g Eutrema salsugineum Thhalv10021250m.g N
gene07522-v1.0-hybrid Fragaria vesca gene07522-v1.0-hybrid N
gene14681-v1.0-hybrid Fragaria vesca gene14681-v1.0-hybrid I
gene26819-v1.0-hybrid Fragaria vesca gene26819-v1.0-hybrid N
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N
GLYMA02G47380 Glycine max GLYMA02G47380 N
GLYMA05G29970 Glycine max GLYMA05G29970 N
GLYMA07G04050 Glycine max GLYMA07G04050 I
GLYMA08G13090 Glycine max GLYMA08G13090 N
GLYMA08G45030 Glycine max GLYMA08G45030 I
GLYMA09G02770 Glycine max GLYMA09G02770 N
GLYMA12G36540 Glycine max GLYMA12G36540 I
GLYMA13G27230 Glycine max GLYMA13G27230 I
GLYMA14G01360 Glycine max GLYMA14G01360 N
GLYMA15G03175 Glycine max GLYMA15G03175 N
GLYMA15G13660 Glycine max GLYMA15G13660 N
GLYMA16G00711 Glycine max GLYMA16G00711 I
GLYMA18G07890 Glycine max GLYMA18G07890 I
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I
Gorai.004G172100 Gossypium raimondii Gorai.004G172100 I
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N
Gorai.011G057600 Gossypium raimondii Gorai.011G057600 N
Gorai.012G010900 Gossypium raimondii Gorai.012G010900 N
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I
Gorai.013G251200 Gossypium raimondii Gorai.013G251200 N
MLOC_52315 Hordeum vulgare MLOC_52315 N
MLOC_5869 Hordeum vulgare MLOC_5869 N
MLOC_62730 Hordeum vulgare MLOC_62730 I
MLOC_67781 Hordeum vulgare MLOC_67781 I
MLOC_76757 Hordeum vulgare MLOC_76757 N
LPERR03G04900 Leersia perrieri LPERR03G04900 I
LPERR03G25340 Leersia perrieri LPERR03G25340 I
LPERR08G05240 Leersia perrieri LPERR08G05240 N
LPERR12G15680 Leersia perrieri LPERR12G15680 N
Lus10009944.g Linum usitatissimum Lus10009944.g I
Lus10011326.g Linum usitatissimum Lus10011326.g I
Lus10012202.g Linum usitatissimum Lus10012202.g I
Lus10016411.g Linum usitatissimum Lus10016411.g I
Lus10019708.g Linum usitatissimum Lus10019708.g I
Lus10023358.g Linum usitatissimum Lus10023358.g N
Lus10030137.g Linum usitatissimum Lus10030137.g I
Lus10038448.g Linum usitatissimum Lus10038448.g N
chr3.CM0724.30.nd Lotus japonicus chr3.CM0724.30.nd I
LjSGA_007063.1 Lotus japonicus LjSGA_007063.1 N
LjT30L14.130.nd Lotus japonicus LjT30L14.130.nd N
MDP0000146933 Malus domestica MDP0000146933 N
MDP0000278621 Malus domestica MDP0000278621 N
MDP0000279028 Malus domestica MDP0000279028 N
MDP0000434309 Malus domestica MDP0000434309 N
MDP0000682805 Malus domestica MDP0000682805 N
cassava2144.valid.m1 Manihot esculenta cassava2144.valid.m1 I
cassava24161.valid.m1 Manihot esculenta cassava24161.valid.m1 N
cassava2701.m1 Manihot esculenta cassava2701.m1 N
cassava29667.valid.m1 Manihot esculenta cassava29667.valid.m1 I
cassava30668.valid.m1 Manihot esculenta cassava30668.valid.m1 I
cassava31873.valid.m1 Manihot esculenta cassava31873.valid.m1 N
cassava31874.valid.m1 Manihot esculenta cassava31874.valid.m1 N
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I
cassava38312.valid.m1 Manihot esculenta cassava38312.valid.m1 N
MTR_2g030170 Medicago truncatula MTR_2g030170 N
MTR_2g099490 Medicago truncatula MTR_2g099490 N
MTR_3g061510 Medicago truncatula MTR_3g061510 N
MTR_8g019540 Medicago truncatula MTR_8g019540 I
MTR_8g037270 Medicago truncatula MTR_8g037270 N
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N
mg014677m Mimulus guttatus mg014677m N
mgf004929m Mimulus guttatus mgf004929m N
mgf012950m Mimulus guttatus mgf012950m I
mgf023313m Mimulus guttatus mgf023313m N
mgf023644m Mimulus guttatus mgf023644m N
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N
GSMUA_Achr4G11090_001 Musa acuminata GSMUA_Achr4G11090_001 I
GSMUA_Achr4G31650_001 Musa acuminata GSMUA_Achr4G31650_001 N
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N
GSMUA_Achr8G30700_001 Musa acuminata GSMUA_Achr8G30700_001 I
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N
GSMUA_AchrUn_randomG15140_001 Musa acuminata GSMUA_AchrUn_randomG15140_001 I
OBART03G05590 Oryza barthii OBART03G05590 I
OBART03G21180 Oryza barthii OBART03G21180 I
OBART03G30600 Oryza barthii OBART03G30600 I
OBART07G21740 Oryza barthii OBART07G21740 I
OBART08G05580 Oryza barthii OBART08G05580 N
OBART12G18640 Oryza barthii OBART12G18640 N
OB02G41320 Oryza brachyantha OB02G41320 I
OB03G15670 Oryza brachyantha OB03G15670 I
OB03G37700 Oryza brachyantha OB03G37700 I
OB07G27370 Oryza brachyantha OB07G27370 I
OB08G15650 Oryza brachyantha OB08G15650 N
OB12G25340 Oryza brachyantha OB12G25340 N
OB12G25960 Oryza brachyantha OB12G25960 N
ORGLA03G0053200 Oryza glaberrima ORGLA03G0053200 I
ORGLA03G0197400 Oryza glaberrima ORGLA03G0197400 I
ORGLA03G0280400 Oryza glaberrima ORGLA03G0280400 I
ORGLA07G0166900 Oryza glaberrima ORGLA07G0166900 I
ORGLA08G0048400 Oryza glaberrima ORGLA08G0048400 N
ORGLA12G0159000 Oryza glaberrima ORGLA12G0159000 N
OGLUM03G05530 Oryza glumaepatula OGLUM03G05530 I
OGLUM03G21930 Oryza glumaepatula OGLUM03G21930 I
OGLUM03G30810 Oryza glumaepatula OGLUM03G30810 I
OGLUM07G21630 Oryza glumaepatula OGLUM07G21630 I
OGLUM08G05950 Oryza glumaepatula OGLUM08G05950 N
OGLUM12G20290 Oryza glumaepatula OGLUM12G20290 N
BGIOSGA011352 Oryza indica BGIOSGA011352 I
BGIOSGA012852 Oryza indica BGIOSGA012852 N
BGIOSGA013378 Oryza indica BGIOSGA013378 I
BGIOSGA023919 Oryza indica BGIOSGA023919 I
BGIOSGA028138 Oryza indica BGIOSGA028138 N
BGIOSGA035844 Oryza indica BGIOSGA035844 N
OLONG_006035 Oryza longistaminata OLONG_006035 I
OLONG_006679 Oryza longistaminata OLONG_006679 I
OLONG_008329 Oryza longistaminata OLONG_008329 N
OLONG_009142 Oryza longistaminata OLONG_009142 I
OLONG_018144 Oryza longistaminata OLONG_018144 N
OMERI03G05270 Oryza meridionalis OMERI03G05270 I
OMERI03G19370 Oryza meridionalis OMERI03G19370 I
OMERI03G26770 Oryza meridionalis OMERI03G26770 I
OMERI07G18140 Oryza meridionalis OMERI07G18140 I
OMERI08G05500 Oryza meridionalis OMERI08G05500 N
OMERI12G14030 Oryza meridionalis OMERI12G14030 N
ONIVA03G05390 Oryza nivara ONIVA03G05390 I
ONIVA03G10270 Oryza nivara ONIVA03G10270 I
ONIVA03G31950 Oryza nivara ONIVA03G31950 I
ONIVA06G16650 Oryza nivara ONIVA06G16650 I
ONIVA08G05590 Oryza nivara ONIVA08G05590 N
ONIVA12G17590 Oryza nivara ONIVA12G17590 N
OPUNC03G05290 Oryza punctata OPUNC03G05290 I
OPUNC03G27900 Oryza punctata OPUNC03G27900 I
OPUNC07G20270 Oryza punctata OPUNC07G20270 I
OPUNC08G05330 Oryza punctata OPUNC08G05330 N
OPUNC12G16850 Oryza punctata OPUNC12G16850 N
ORUFI03G05370 Oryza rufipogon ORUFI03G05370 I
ORUFI03G21850 Oryza rufipogon ORUFI03G21850 I
ORUFI03G31840 Oryza rufipogon ORUFI03G31840 I
ORUFI07G22690 Oryza rufipogon ORUFI07G22690 I
ORUFI08G06250 Oryza rufipogon ORUFI08G06250 N
ORUFI12G20840 Oryza rufipogon ORUFI12G20840 N
OS03G0174900 Oryza sativa OS03G0174900 I
OS03G0411100 Oryza sativa OS03G0411100 N
OS03G0696300 Oryza sativa OS03G0696300 I
OS07G0608200 Oryza sativa OS07G0608200 I
OS08G0196700 Oryza sativa OS08G0196700 N
OS12G0613000 Oryza sativa OS12G0613000 N
Pavir.Aa00318 Panicum virgatum Pavir.Aa00318 I
Pavir.Ba00442 Panicum virgatum Pavir.Ba00442 I
Pavir.Ca02834 Panicum virgatum Pavir.Ca02834 N
Pavir.Cb00052 Panicum virgatum Pavir.Cb00052 N
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I
Pavir.Ia04345 Panicum virgatum Pavir.Ia04345 I
Pavir.Ib00471 Panicum virgatum Pavir.Ib00471 I
Pavir.J00945 Panicum virgatum Pavir.J00945 I
Pavir.J05826 Panicum virgatum Pavir.J05826 I
Pavir.J06031 Panicum virgatum Pavir.J06031 N
Pavir.J08102 Panicum virgatum Pavir.J08102 I
Pavir.J24924 Panicum virgatum Pavir.J24924 N
PDK_20s1300541g001 Phoenix dactylifera PDK_20s1300541g001 I
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N
PDK_20s1462571g003 Phoenix dactylifera PDK_20s1462571g003 N
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N
POPTR_0001s26480 Populus trichocarpa POPTR_0001s26480 N
POPTR_0001s27300 Populus trichocarpa POPTR_0001s27300 N
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I
POPTR_0009s06540 Populus trichocarpa POPTR_0009s06540 N
POPTR_0011s10080 Populus trichocarpa POPTR_0011s10080 N
Pm010516 Prunus mume Pm010516 N
Pm012301 Prunus mume Pm012301 I
Pm013295 Prunus mume Pm013295 N
Pm016266 Prunus mume Pm016266 N
PRUPE_ppa006634mg Prunus persica PRUPE_ppa006634mg I
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N
PRUPE_ppa020977mg Prunus persica PRUPE_ppa020977mg N
29864.m001503 Ricinus communis 29864.m001503 N
30075.m001182 Ricinus communis 30075.m001182 N
30169.m006445 Ricinus communis 30169.m006445 I
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N
SapurV1A.0111s0280 Salix purpurea SapurV1A.0111s0280 N
SapurV1A.0133s0410 Salix purpurea SapurV1A.0133s0410 I
SapurV1A.0563s0020 Salix purpurea SapurV1A.0563s0020 N
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N
SELMODRAFT_38090 Selaginella moellendorffii SELMODRAFT_38090 N
SELMODRAFT_438143 Selaginella moellendorffii SELMODRAFT_438143 N
Si023231m.g Setaria italica Si023231m.g N
Si030663m.g Setaria italica Si030663m.g I
Si037045m.g Setaria italica Si037045m.g I
Si037269m.g Setaria italica Si037269m.g I
Solyc01g008490.2 Solanum lycopersicum Solyc01g008490.2 N
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I
Solyc02g069860.2 Solanum lycopersicum Solyc02g069860.2 N
Solyc08g062210.2 Solanum lycopersicum Solyc08g062210.2 I
Solyc11g065700.1 Solanum lycopersicum Solyc11g065700.1 N
PGSC0003DMG400006863 Solanum tuberosum PGSC0003DMG400006863 I
PGSC0003DMG400007350 Solanum tuberosum PGSC0003DMG400007350 N
PGSC0003DMG400010697 Solanum tuberosum PGSC0003DMG400010697 N
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N
PGSC0003DMG401021124 Solanum tuberosum PGSC0003DMG401021124 N
Sb01g011220 Sorghum bicolor Sb01g011220 I
Sb01g032710 Sorghum bicolor Sb01g032710 I
Sb01g045500 Sorghum bicolor Sb01g045500 I
Sb02g038960 Sorghum bicolor Sb02g038960 I
Sb04g034760 Sorghum bicolor Sb04g034760 I
Sb08g021370 Sorghum bicolor Sb08g021370 N
TCM_005875 Theobroma cacao TCM_005875 I
TCM_024732 Theobroma cacao TCM_024732 I
TCM_026909 Theobroma cacao TCM_026909 N
TCM_029103 Theobroma cacao TCM_029103 N
TCM_037576 Theobroma cacao TCM_037576 N
TCM_040712 Theobroma cacao TCM_040712 I
Traes_2AS_7C177F9DB Triticum aestivum Traes_2AS_7C177F9DB I
Traes_2BS_A95B28510 Triticum aestivum Traes_2BS_A95B28510 I
Traes_2DS_69FBC78BC Triticum aestivum Traes_2DS_69FBC78BC I
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I
Traes_4AS_2603E68AF Triticum aestivum Traes_4AS_2603E68AF I
Traes_4BL_7DA93696E Triticum aestivum Traes_4BL_7DA93696E I
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I
Traes_4DL_8156B39DF Triticum aestivum Traes_4DL_8156B39DF I
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I
Traes_5AS_178725FAF Triticum aestivum Traes_5AS_178725FAF N
Traes_5BS_49C7C1976 Triticum aestivum Traes_5BS_49C7C1976 N
Traes_5DS_5B1AB0AD3 Triticum aestivum Traes_5DS_5B1AB0AD3 N
TRIUR3_08409 Triticum urartu TRIUR3_08409 I
TRIUR3_09920 Triticum urartu TRIUR3_09920 I
TRIUR3_22025 Triticum urartu TRIUR3_22025 I
TRIUR3_30486 Triticum urartu TRIUR3_30486 N
VIT_06s0004g02270 Vitis vinifera VIT_06s0004g02270 N
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I
VIT_10s0003g04650 Vitis vinifera VIT_10s0003g04650 N
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I
GRMZM2G000686 Zea mays GRMZM2G000686 I
GRMZM2G038303 Zea mays GRMZM2G038303 I
GRMZM2G040349 Zea mays GRMZM2G040349 I
GRMZM2G091964 Zea mays GRMZM2G091964 I
GRMZM2G104396 Zea mays GRMZM2G104396 N
GRMZM2G361842 Zea mays GRMZM2G361842 N