CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA07G13980 *(Glycine max)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	GLYMA07G13980	T001831_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF14 M01045_2.00	Arabidopsis thaliana	NVGCCGNCN	NGNCGGCBN	PBM Sullivan et al.(2014) pTH9793	0.738	0.692
ERF095 M06624_2.00	Arabidopsis thaliana	YCDCCGCCGCCRYHD	HDRYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ESE1_col_a	0.728	0.731
ERF095 M06625_2.00	Arabidopsis thaliana	YHNYYDYHDCCGCCGCCDYH	DRHGGCGGCGGHDRHRRNDR	Dap-seq OMalley et al.(2016) ESE1_colamp_a	0.728	0.731
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.722	0.692
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.722	0.692
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.722	0.692
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.718	0.673
ERF1B M01619_2.00	Arabidopsis thaliana	NMGCCGCCRN	NYGGCGGCKN	PBM Weirauch et al.(2014) pTH8795	0.716	0.712
ERF1B M06626_2.00	Arabidopsis thaliana	NHNNHDYMGCCGCCRYHDNHDNNNNNNN	NNNNNNNHDNHDRYGGCGGCKRHDNNDN	Dap-seq OMalley et al.(2016) ERF1_col_a	0.716	0.712
ERF1B M06627_2.00	Arabidopsis thaliana	MGCCGCCD	HGGCGGCK	Dap-seq OMalley et al.(2016) ERF1_colamp_a	0.716	0.712
ERF1B M09703_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2_01	0.716	0.712
ERF1B M09704_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2	0.716	0.712
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.705	0.712
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.705	0.712
ERF106 M01628_2.00	Arabidopsis thaliana	NNNVCRVCN	NGBYGBNNN	PBM Weirauch et al.(2014) pTH7426	0.702	0.635
ERF094 M01602_2.00	Arabidopsis thaliana	VGCCGCCD	HGGCGGCB	PBM Weirauch et al.(2014) pTH8276	0.701	0.712
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.700	0.712
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.699	0.635
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.699	0.635
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.694	0.692
ERF2 M01631_2.00	Arabidopsis thaliana	NNNGCCGNCN	NGNCGGCNNN	PBM Weirauch et al.(2014) pTH8113	0.688	0.692
ERF2 M06672_2.00	Arabidopsis thaliana	HHNHHNYHDYCGCCGCCRYND	HNRYGGCGGCGRHDRNDDNDD	Dap-seq OMalley et al.(2016) ERF2_col_a	0.688	0.692
ERF2 M06673_2.00	Arabidopsis thaliana	NNNNNNNHNNHDSMGCCGCCR	YGGCGGCKSHDNNDNNNNNNN	Dap-seq OMalley et al.(2016) ERF2_colamp_a	0.688	0.692
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.680	0.692
P93392_TOBAC M09731_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$OPBP1_01	0.678	0.712
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA07G13980.2	AP2	119	171	LSFRGVRRRPWGKYAAEIRDAKRNGVRVWLGTYETAENAALAYDRAAFKMHGS

Links
Other AP2 family TFs
Other *Glycine max* TFs

818 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
evm.TU.supercontig_34.221	Carica papaya	evm.TU.supercontig_34.221	N
Ca_10228	Cicer arietinum	Ca_10228	N
Cla011265	Citrullus lanatus	Cla011265	N
Ciclev10016383m.g	Citrus clementina	Ciclev10016383m.g	N
orange1.1g025739m.g	Citrus sinensis	orange1.1g025739m.g	N
Cucsa.142580	Cucumis sativus	Cucsa.142580	N
Eucgr.J00637	Eucalyptus grandis	Eucgr.J00637	N
GLYMA13G03880	Glycine max	GLYMA13G03880	N
Gorai.013G266400	Gossypium raimondii	Gorai.013G266400	N
MTR_5g088230	Medicago truncatula	MTR_5g088230	N
mgf016309m	Mimulus guttatus	mgf016309m	N
POPTR_0001s22790	Populus trichocarpa	POPTR_0001s22790	N
POPTR_0009s02360	Populus trichocarpa	POPTR_0009s02360	N
Pm001671	Prunus mume	Pm001671	N
PRUPE_ppa022266mg	Prunus persica	PRUPE_ppa022266mg	N
30089.m001012	Ricinus communis	30089.m001012	N
SapurV1A.0977s0060	Salix purpurea	SapurV1A.0977s0060	N
SapurV1A.1066s0010	Salix purpurea	SapurV1A.1066s0010	N
SapurV1A.1951s0040	Salix purpurea	SapurV1A.1951s0040	N
SapurV1A.3860s0010	Salix purpurea	SapurV1A.3860s0010	N
Solyc01g008980.2	Solanum lycopersicum	Solyc01g008980.2	N
PGSC0003DMG400022706	Solanum tuberosum	PGSC0003DMG400022706	N
TCM_042034	Theobroma cacao	TCM_042034	N
VIT_06s0009g01790	Vitis vinifera	VIT_06s0009g01790	N

GLYMA07G13980 (Glycine max) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

818 Related TFs

GLYMA07G13980 **(Glycine max)
AP2**