CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G11150
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA12G11150
T001916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.718
0.917
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G11150.3
AP2
65
115
CNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAAMAMYG
GLYMA12G11150.4
AP2
65
115
CNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAAMAMYG
Links
Other
AP2
family TFs
Other
Glycine max
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB4
Felis catus
ENSFCAG00000029504
N
ENSGMOG00000007716
Gadus morhua
ENSGMOG00000007716
N
ENSMICG00000000950
Microcebus murinus
ENSMICG00000000950
N
ENSONIG00000009228
Oreochromis niloticus
ENSONIG00000009228
N
ENSPFOG00000008187
Poecilia formosa
ENSPFOG00000008187
N
ENSTRUG00000012490
Takifugu rubripes
ENSTRUG00000012490
N
ENSTNIG00000001659
Tetraodon nigroviridis
ENSTNIG00000001659
N