CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G38030
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA13G38030
T001950_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.724
0.939
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G38030.1
AP2
63
114
CNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGS
Links
Other
AP2
family TFs
Other
Glycine max
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_180216
Agaricus bisporus
AGABI2DRAFT_180216
N
H311_02629
Anncaliia algerae
H311_02629
N
AWRI1499_4487
Brettanomyces bruxellensis
AWRI1499_4487
I
CAD26113
Encephalitozoon cuniculi
CAD26113
N
EHEL_111920
Encephalitozoon hellem
EHEL_111920
N
Eint_111930
Encephalitozoon intestinalis
Eint_111930
N
EROM_111920
Encephalitozoon romaleae
EROM_111920
N
EBI_24318
Enterocytozoon bieneusi
EBI_24318
N
FOMPIDRAFT_39384
Fomitopsis pinicola
FOMPIDRAFT_39384
N
e_gw1.5.528.1
Heterobasidion annosum
e_gw1.5.528.1
N
Moror_5215
Moniliophthora roreri
Moror_5215
N
gw1.4.1763.1
Mucor circinelloides
gw1.4.1763.1
N
NCER_101028
Nosema ceranae
NCER_101028
N
M896_121900
Ordospora colligata
M896_121900
N
PDIP_53990
Penicillium digitatum
PDIP_53990
N
gwh2.9.410.1
Phanerochaete chrysosporium
gwh2.9.410.1
N
PHLGIDRAFT_73850
Phlebiopsis gigantea
PHLGIDRAFT_73850
N
gw1.1.777.1
Phycomyces blakesleeanus
gw1.1.777.1
N
gw1.1.808.1
Phycomyces blakesleeanus
gw1.1.808.1
N
gw1.66.42.1
Phycomyces blakesleeanus
gw1.66.42.1
N
PILCRDRAFT_36344
Piloderma croceum
PILCRDRAFT_36344
N
PLEOSDRAFT_18759
Pleurotus ostreatus
PLEOSDRAFT_18759
N
Z518_08946
Rhinocladiella mackenziei
Z518_08946
N
SERLA73DRAFT_17521
Serpula lacrymans
SERLA73DRAFT_17521
N
M422DRAFT_127323
Sphaerobolus stellatus
M422DRAFT_127323
N
e_gw1.7.455.1
Tremella mesenterica
e_gw1.7.455.1
N
A1Q1_01456
Trichosporon asahii
A1Q1_01456
N
UV8b_7728
Ustilaginoidea virens
UV8b_7728
N
VICG_01897
Vittaforma corneae
VICG_01897
N
YALI0_E16236g
Yarrowia lipolytica
YALI0_E16236g
N