CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA17G27520 *(Glycine max)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	GLYMA17G27520	T002014_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TINY M01094_2.00	Arabidopsis thaliana	NHRCCGACAN	NTGTCGGYDN	PBM Lambert et al.(2019) pTH11541	0.765	0.920
TINY M06669_2.00	Arabidopsis thaliana	HNYCRCCGACANHDN	NHDNTGTCGGYGRND	Dap-seq OMalley et al.(2016) TINY_col_a	0.765	0.920
ERF043 M01627_2.00	Arabidopsis thaliana	YRCCGACA	TGTCGGYR	PBM Weirauch et al.(2014) pTH7413	0.759	0.900
ERF043 M06651_2.00	Arabidopsis thaliana	NNYCACCGACANHNNN	NNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_colamp_a	0.759	0.900
ERF043 M06652_2.00	Arabidopsis thaliana	NNYCACCGACANHNNH	DNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_col	0.759	0.900
ERF034 M06614_2.00	Arabidopsis thaliana	NHNYCACCGACANHD	HDNTGTCGGTGRNDN	Dap-seq OMalley et al.(2016) At2g44940_col_a	0.751	0.900
ERF034 M06615_2.00	Arabidopsis thaliana	NDBCACCGACANH	DNTGTCGGTGVHN	Dap-seq OMalley et al.(2016) At2g44940_colamp_a	0.751	0.900
ERF035 M06631_2.00	Arabidopsis thaliana	YCACCGACANWDNH	DNHWNTGTCGGTGR	Dap-seq OMalley et al.(2016) AT3G60490_col_a	0.749	0.900
ERF035 M06632_2.00	Arabidopsis thaliana	NNBCACCGACAHWNNN	NNNWDTGTCGGTGVNN	Dap-seq OMalley et al.(2016) AT3G60490_colamp_a	0.749	0.900
Q8LKX0_MAIZE M09722_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DBF2_01	0.717	0.900
Q5MAR7_BRANA M09742_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII1_01	0.715	0.880
Q3HS44_BRANA M09741_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII2_01	0.715	0.880
Q3HS43_BRANA M09740_2.00	Brassica napus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$DREBIII3_01	0.715	0.880
ERF039 M01620_2.00	Arabidopsis thaliana	NNRCCGACDN	NHGTCGGYNN	PBM Weirauch et al.(2014) pTH8101	0.706	0.880
ERF039 M06635_2.00	Arabidopsis thaliana	HNNHDYCRCCGMCRN	NYGKCGGYGRHDNND	Dap-seq OMalley et al.(2016) At4g16750_col_a	0.706	0.880
ERF039 M06636_2.00	Arabidopsis thaliana	NNNNNNYCACCGACAHH	DDTGTCGGTGRNNNNNN	Dap-seq OMalley et al.(2016) At4g16750_colamp_a	0.706	0.880
ERF038 M06608_2.00	Arabidopsis thaliana	NHNHHDYCRCCGACA	TGTCGGYGRHDDNDN	Dap-seq OMalley et al.(2016) ERF38_col_a	0.706	0.860
AT3G16280 M06618_2.00	Arabidopsis thaliana	NDNCACCGACANHN	NDNTGTCGGTGNHN	Dap-seq OMalley et al.(2016) AT3G16280_col_a	0.702	0.860
AT3G16280 M06619_2.00	Arabidopsis thaliana	BCACCGACAHWNNN	NNNWDTGTCGGTGV	Dap-seq OMalley et al.(2016) AT3G16280_colamp_a	0.702	0.860
ERF037 M00843_2.00	Arabidopsis thaliana	NRCCGACRN	NYGTCGGYN	PBM Franco-Zorrilla et al.(2014) At1g77200	0.692	0.880
ERF037 M06599_2.00	Arabidopsis thaliana	YCRCCGACAHHNNH	DNNDDTGTCGGYGR	Dap-seq OMalley et al.(2016) AT1G77200_col_a	0.692	0.880
ERF037 M06600_2.00	Arabidopsis thaliana	NNYACCGACAHN	NDTGTCGGTRNN	Dap-seq OMalley et al.(2016) AT1G77200_colamp_a	0.692	0.880
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA17G27520.2	AP2	40	91	PVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALGIKGN

Links
Other AP2 family TFs
Other *Glycine max* TFs

437 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL013653	Aedes aegypti	AAEL013653	N
AALB008022	Anopheles albimanus	AALB008022	N
AARA002613	Anopheles arabiensis	AARA002613	N
AARA008085	Anopheles arabiensis	AARA008085	N
AATE004417	Anopheles atroparvus	AATE004417	N
ACHR000830	Anopheles christyi	ACHR000830	N
ACHR003814	Anopheles christyi	ACHR003814	N
ACOM025760	Anopheles coluzzii	ACOM025760	N
ACUA017562	Anopheles culicifacies	ACUA017562	N
ACUA022967	Anopheles culicifacies	ACUA022967	N
ADAC005282	Anopheles darlingi	ADAC005282	N
ADIR001353	Anopheles dirus	ADIR001353	N
ADIR007200	Anopheles dirus	ADIR007200	N
AEPI005949	Anopheles epiroticus	AEPI005949	N
AEPI009152	Anopheles epiroticus	AEPI009152	N
AFAF013567	Anopheles farauti	AFAF013567	N
AFAF018377	Anopheles farauti	AFAF018377	N
AFUN001038	Anopheles funestus	AFUN001038	N
AFUN003868	Anopheles funestus	AFUN003868	N
AGAP000336	Anopheles gambiae	AGAP000336	N
AGAP007517	Anopheles gambiae	AGAP007517	N
AMAM019785	Anopheles maculatus	AMAM019785	N
AMEC017669	Anopheles melas	AMEC017669	N
AMEC000435	Anopheles melas	AMEC000435	N
AMEM015155	Anopheles merus	AMEM015155	N
AMEM008561	Anopheles merus	AMEM008561	N
AMIN010411	Anopheles minimus	AMIN010411	N
AMIN005487	Anopheles minimus	AMIN005487	N
AQUA007272	Anopheles quadriannulatus	AQUA007272	N
AQUA004406	Anopheles quadriannulatus	AQUA004406	N
ASIS017447	Anopheles sinensis	ASIS017447	N
ASTEI08810	Anopheles stephensi	ASTEI08810	N
GB45421	Apis mellifera	GB45421	N
ACEP26919	Atta cephalotes	ACEP26919	N
BGIBMGA003121	Bombyx mori	BGIBMGA003121	N
Cflo_02113--XP_396371.3_APIME	Camponotus floridanus	Cflo_02113--XP_396371.3_APIME	N
CpipJ_CPIJ003789	Culex pipiens	CpipJ_CPIJ003789	N
CPIJ003789	Culex quinquefasciatus	CPIJ003789	N
KGM_18877	Danaus plexippus	KGM_18877	N
DAPPUDRAFT_304868	Daphnia pulex	DAPPUDRAFT_304868	N
YQE_07182	Dendroctonus ponderosae	YQE_07182	N
GF21727	Drosophila ananassae	FBgn0098727	N
GG18249	Drosophila erecta	FBgn0110465	N
GH11849	Drosophila grimshawi	FBgn0119328	N
GH10255	Drosophila grimshawi	FBgn0117736	N
Trf2	Drosophila melanogaster	FBgn0261793	N
GI14331	Drosophila mojavensis	FBgn0137084	N
GL16412	Drosophila persimilis	FBgn0154016	N
GA14764	Drosophila pseudoobscura	FBgn0074791	N
GM21561	Drosophila sechellia	FBgn0176441	N
GJ17285	Drosophila virilis	FBgn0204460	N
GJ19385	Drosophila virilis	FBgn0206528	N
GK16294	Drosophila willistoni	FBgn0218296	N
GE15780	Drosophila yakuba	FBgn0233345	N
HHAL006636-PA	Halyomorpha halys	HHAL006636-PA	N
Hsal_05746--XP_396371.3_APIME	Harpegnathos saltator	Hsal_05746--XP_396371.3_APIME	N
HMEL012402	Heliconius melpomene	HMEL012402	N
ISCW018321	Ixodes scapularis	ISCW018321	N
LDEC018353	Leptinotarsa decemlineata	LDEC018353	N
LCUP013707	Lucilia cuprina	LCUP013707	N
LLOJ009650	Lutzomyia longipalpis	LLOJ009650	N
MCINX007554	Melitaea cinxia	MCINX007554	N
MDOA002006	Musca domestica	MDOA002006	N
PHUM375280	Pediculus humanus	PHUM375280	N
PPAI002384	Phlebotomus papatasi	PPAI002384	N
RPRC008747	Rhodnius prolixus	RPRC008747	N
SINV24562	Solenopsis invicta	SINV24562	N
SMAR014284	Strigamia maritima	SMAR014284	N
TC014666	Tribolium castaneum	TC014666	N
L798_06110	Zootermopsis nevadensis	L798_06110	N

GLYMA17G27520 (Glycine max) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

437 Related TFs

GLYMA17G27520 **(Glycine max)
AP2**