CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G055204
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G055204
T002117_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.817
0.920
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.817
0.920
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.813
0.920
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G055204_P01
AP2
163
214
KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEDAALAYDKAAFRLRGD
Links
Other
AP2
family TFs
Other
Zea mays
TFs
437 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00097g46
Arthrobotrys oligospora
AOL_s00097g46
N
AGOS_AEL176C
Ashbya gossypii
AGOS_AEL176C
N
M437DRAFT_83846
Aureobasidium melanogenum
M437DRAFT_83846
N
M438DRAFT_97521
Aureobasidium pullulans
M438DRAFT_97521
N
AUEXF2481DRAFT_27191
Aureobasidium subglaciale
AUEXF2481DRAFT_27191
N
BAUCODRAFT_34049
Baudoinia compniacensis
BAUCODRAFT_34049
N
BGHDH14_bgh02243
Blumeria graminis
BGHDH14_bgh02243
N
Bcin10g04400
Botrytis cinerea
Bcin10g04400
N
PGUG_01009
Candida guilliermondii
PGUG_01009
N
CORT_0A09010
Candida orthopsilosis
CORT_0A09010
N
CPAG_01194
Candida parapsilosis
CPAG_01194
N
A1O3_01321
Capronia epimyces
A1O3_01321
N
Z519_04250
Cladophialophora bantiana
Z519_04250
N
G647_06777
Cladophialophora carrionii
G647_06777
N
PV07_03969
Cladophialophora immunda
PV07_03969
N
A1O5_10088
Cladophialophora psammophila
A1O5_10088
N
A1O7_05748
Cladophialophora yegresii
A1O7_05748
N
CFIO01_13194
Colletotrichum fioriniae
CFIO01_13194
N
CGGC5_975
Colletotrichum gloeosporioides
CGGC5_975
N
GLRG_01306
Colletotrichum graminicola
GLRG_01306
N
CH063_12954
Colletotrichum higginsianum
CH063_12954
N
Cob_01758
Colletotrichum orbiculare
Cob_01758
N
CSUB01_05390
Colletotrichum sublineola
CSUB01_05390
N
W97_02882
Coniosporium apollinis
W97_02882
N
H072_5668
Dactylellina haptotyla
H072_5668
N
DEHA2C15378g
Debaryomyces hansenii
DEHA2C15378g
N
DOTSEDRAFT_69606
Dothistroma septosporum
DOTSEDRAFT_69606
N
DRE_02746
Drechslerella stenobrocha
DRE_02746
N
Ecym_6298
Eremothecium cymbalariae
Ecym_6298
N
EV44_g2178
Erysiphe necator
EV44_g2178
N
HMPREF1120_08485
Exophiala dermatitidis
HMPREF1120_08485
N
PV06_00365
Exophiala oligosperma
PV06_00365
N
PV11_01510
Exophiala sideris
PV11_01510
N
PV08_04239
Exophiala spinifera
PV08_04239
N
PV05_05003
Exophiala xenobiotica
PV05_05003
N
Z517_00692
Fonsecaea pedrosoi
Z517_00692
N
FFUJ_12231
Fusarium fujikuroi
FFUJ_12231
N
FGRRES_01915
Fusarium graminearum
FGRRES_01915
N
FOXG_04220
Fusarium oxysporum
FOXG_04220
N
FOXG_15050
Fusarium oxysporum
FOXG_15050
N
FOXG_14431
Fusarium oxysporum
FOXG_14431
N
FPSE_09133
Fusarium pseudograminearum
FPSE_09133
N
NechaG50578
Fusarium solani
NechaG50578
N
GGTG_14195
Gaeumannomyces graminis
GGTG_14195
N
PAS_chr1-4_0102
Komagataella pastoris
PAS_chr1-4_0102
N
KUCA_T00000069001
Kuraishia capsulata
KUCA_T00000069001
N
MPH_08639
Macrophomina phaseolina
MPH_08639
N
MAPG_03921
Magnaporthe poae
MAPG_03921
N
MBM_01244
Marssonina brunnea
MBM_01244
N
MAC_06449
Metarhizium acridum
MAC_06449
N
MANI_018332
Metarhizium anisopliae
MANI_018332
N
MBR_07492
Metarhizium brunneum
MBR_07492
N
MGU_03784
Metarhizium guizhouense
MGU_03784
N
MAJ_03662
Metarhizium majus
MAJ_03662
N
X797_003404
Metarhizium robertsii
X797_003404
N
PGUG_01009
Meyerozyma guilliermondii
PGUG_01009
N
GNLVRS01_PISO0L20779g
Millerozyma farinosa
GNLVRS01_PISO0L20779g
N
GNLVRS01_PISO0K20778g
Millerozyma farinosa
GNLVRS01_PISO0K20778g
N
e_gw1.14.414.1
Mycosphaerella fijiensis
e_gw1.14.414.1
N
estExt_Genewise1.C_chr_100086
Mycosphaerella graminicola
estExt_Genewise1.C_chr_100086
N
e_gw1.14.618.1
Nectria haematococca
e_gw1.14.618.1
N
UCRNP2_4441
Neofusicoccum parvum
UCRNP2_4441
N
OIDMADRAFT_141697
Oidiodendron maius
OIDMADRAFT_141697
N
OCS_04024
Ophiocordyceps sinensis
OCS_04024
N
PFICI_08362
Pestalotiopsis fici
PFICI_08362
N
SNOG_13398
Phaeosphaeria nodorum
SNOG_13398
N
XP_002490213.1
Pichia pastoris
XP_002490213.1
N
PODANS_2_2600
Podospora anserina
PODANS_2_2600
N
MYCFIDRAFT_39346
Pseudocercospora fijiensis
MYCFIDRAFT_39346
N
GMDG_03182
Pseudogymnoascus destructans
GMDG_03182
N
GMDG_02112
Pseudogymnoascus destructans
GMDG_02112
N
V499_07080
Pseudogymnoascus pannorum
V499_07080
N
AACERI_AaceriAEL176C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL176C
N
SBOR_10075
Sclerotinia borealis
SBOR_10075
N
SS1G_12488
Sclerotinia sclerotiorum
SS1G_12488
N
SEPMUDRAFT_147483
Sphaerulina musiva
SEPMUDRAFT_147483
N
SNOG_13398
Stagonospora nodorum
SNOG_13398
N
VHEMI10091
Torrubiella hemipterigena
VHEMI10091
N
VHEMI10725
Torrubiella hemipterigena
VHEMI10725
N
UV8b_1370
Ustilaginoidea virens
UV8b_1370
N
PV09_06457
Verruconis gallopava
PV09_06457
N
VDBG_09326
Verticillium albo atrum
VDBG_09326
N
VDBG_09326
Verticillium alfalfae
VDBG_09326
N
VDAG_04562
Verticillium dahliae
VDAG_04562
N
BN7_5534
Wickerhamomyces ciferrii
BN7_5534
N
Mycgr3G62856
Zymoseptoria tritici
Mycgr3G62856
N