GRMZM2G139082 (Zea mays)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GRMZM2G139082 T002179_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.934 0.971
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.934 0.971
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.892 0.914
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.892 0.914
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.889 0.914
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.889 0.914
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.853 0.886
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.853 0.886
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G139082_P01 AP2 139 199
GRMZM2G139082_P01 AP2 241 293
GRMZM2G139082_P02 AP2 139 199
GRMZM2G139082_P02 AP2 241 288

Links

Other AP2 family TFs
Other Zea mays TFs

627 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18928 Aegilops tauschii F775_18928 I
estExt_fgeneshCV_pg.C_60079 Chlorella vulgaris estExt_fgeneshCV_pg.C_60079 N
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I
Cucsa.397260 Cucumis sativus Cucsa.397260 I
GLYMA04G05390 Glycine max GLYMA04G05390 I
GLYMA06G05450 Glycine max GLYMA06G05450 I
GLYMA17G34791 Glycine max GLYMA17G34791 I
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I
MLOC_52982 Hordeum vulgare MLOC_52982 I
LPERR05G23440 Leersia perrieri LPERR05G23440 I
Lus10027781.g Linum usitatissimum Lus10027781.g I
LjSGA_061558.1 Lotus japonicus LjSGA_061558.1 I
MTR_3g104370 Medicago truncatula MTR_3g104370 I
mgf026007m Mimulus guttatus mgf026007m I
OBART05G18640 Oryza barthii OBART05G18640 I
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I
Pavir.J01328 Panicum virgatum Pavir.J01328 I
Pavir.J35324 Panicum virgatum Pavir.J35324 I
Pavir.J38363 Panicum virgatum Pavir.J38363 I
Si022624m.g Setaria italica Si022624m.g I
Sb09g030390 Sorghum bicolor Sb09g030390 I
Sb09g006060 Sorghum bicolor Sb09g006060 I
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I
GRMZM2G176568 Zea mays GRMZM2G176568 I