CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_26140
(
Hordeum vulgare
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MLOC_26140
T002694_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_26140.1
AP2
48
100
RAFRGVRKRPWGKHAVEIWESTRNGVRVWLGTFESPEAATLAYDQAAFALRGG
MLOC_26140.2
AP2
48
100
RAFRGVRKRPWGKHAVEIWESTRNGVRVWLGTFESPEAATLAYDQAAFALRGG
Links
Other
AP2
family TFs
Other
Hordeum vulgare
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_25471
Aegilops tauschii
F775_25471
I
0.709
BRADI1G00670
Brachypodium distachyon
BRADI1G00670
I
0.706
Gorai.005G049300
Gossypium raimondii
Gorai.005G049300
I
0.680
Gorai.004G057000
Gossypium raimondii
Gorai.004G057000
I
0.683
Gorai.007G145800
Gossypium raimondii
Gorai.007G145800
I
0.682
MLOC_80197
Hordeum vulgare
MLOC_80197
I
0.709
Lus10042557.g
Linum usitatissimum
Lus10042557.g
I
0.696
Lus10022935.g
Linum usitatissimum
Lus10022935.g
I
0.681
Lus10022015.g
Linum usitatissimum
Lus10022015.g
I
0.696
MDP0000447570
Malus domestica
MDP0000447570
I
0.685
MDP0000246808
Malus domestica
MDP0000246808
I
0.685
cassava37347.valid.m1
Manihot esculenta
cassava37347.valid.m1
I
0.683
cassava38166.valid.m1
Manihot esculenta
cassava38166.valid.m1
I
0.684
OPUNC03G38860
Oryza punctata
OPUNC03G38860
I
0.700
Pavir.Ia00066
Panicum virgatum
Pavir.Ia00066
I
0.680
Pavir.J16149
Panicum virgatum
Pavir.J16149
I
0.688
29680.m001678
Ricinus communis
29680.m001678
I
0.690
29584.m000234
Ricinus communis
29584.m000234
I
0.683
Si038911m.g
Setaria italica
Si038911m.g
I
0.700
Sb01g000352
Sorghum bicolor
Sb01g000352
I
0.687
TCM_004056
Theobroma cacao
TCM_004056
I
0.682
Traes_2BL_0B09B840B
Triticum aestivum
Traes_2BL_0B09B840B
I
0.709
VIT_14s0081g00730
Vitis vinifera
VIT_14s0081g00730
I
0.680
GRMZM2G381441
Zea mays
GRMZM2G381441
I
0.685