ORGLA06G0065100 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA06G0065100 T003918_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.724 0.863
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.711 0.824
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.692 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0065100.1 AP2 69 120

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_16884 Cicer arietinum Ca_16884 N
chr5.CM0048.50.nd Lotus japonicus chr5.CM0048.50.nd N
LjSGA_107581.1 Lotus japonicus LjSGA_107581.1 N
cassava11118.m1 Manihot esculenta cassava11118.m1 I
MTR_5g093010 Medicago truncatula MTR_5g093010 N
MTR_7g028905 Medicago truncatula MTR_7g028905 N
29613.m000372 Ricinus communis 29613.m000372 N