ORUFI04G29600 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI04G29600 T004036_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.786 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.786 0.843
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.731 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G29600.1 AP2 2 53

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

374 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I
CAMTA5 Arabidopsis thaliana AT4G16150 D
AT3G16940 Arabidopsis thaliana AT3G16940 I
Bra038040 Brassica rapa Bra038040 I
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I
Cucsa.325250 Cucumis sativus Cucsa.325250 I
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I
GLYMA07G37090 Glycine max GLYMA07G37090 I
GLYMA17G03510 Glycine max GLYMA17G03510 I
Gorai.012G074000 Gossypium raimondii Gorai.012G074000 I
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I
Lus10041126.g Linum usitatissimum Lus10041126.g I
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I
MDP0000164873 Malus domestica MDP0000164873 I
MDP0000167705 Malus domestica MDP0000167705 I
MDP0000233860 Malus domestica MDP0000233860 I
mgf013655m Mimulus guttatus mgf013655m I
mgf012030m Mimulus guttatus mgf012030m I
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I
Sb02g033620 Sorghum bicolor Sb02g033620 I
TCM_021327 Theobroma cacao TCM_021327 I
Traes_2AS_4C4190DEB Triticum aestivum Traes_2AS_4C4190DEB I
GRMZM2G032336 Zea mays GRMZM2G032336 I