POPTR_0014s09540 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0014s09540 T004728_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF023
M06560_2.00 		Arabidopsis thaliana
DYCACCGACANHDNN
NNHDNTGTCGGTGRH		 Dap-seq
OMalley et al.(2016)
AT1G01250_col_a 		0.803 0.940
ERF023
M06561_2.00 		Arabidopsis thaliana
HHNHHDHCACCGACA
TGTCGGTGDHDDNDD		 Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a 		0.803 0.940
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.679 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s09540.1 AP2 38 89

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000006966 Anas platyrhynchos ENSAPLG00000006966 N 0.000
ANCDUO_21460 Ancylostoma duodenale ANCDUO_21460 N 0.000
ANCDUO_21488 Ancylostoma duodenale ANCDUO_21488 N 0.000
ACAC_0000073601 Angiostrongylus cantonensis ACAC_0000073601 N 0.000
ACOC_0001152601 Angiostrongylus costaricensis ACOC_0001152601 N 0.000
ACUA018278 Anopheles culicifacies ACUA018278 N 0.000
ASIS021566 Anopheles sinensis ASIS021566 N 0.000
ACEP17701 Atta cephalotes ACEP17701 N 0.000
BGLB008237 Biomphalaria glabrata BGLB008237 N 0.000
Brh_R000003 Buceros rhinoceros Brh_R000003 I 0.000
CJA41362 Caenorhabditis japonica CJA41362 N 0.000
CJA33058 Caenorhabditis japonica CJA33058 N 0.000
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.000
Carubv10013054m.g Capsella rubella Carubv10013054m.g N 0.000
Cmyd_10012611 Chelonia mydas Cmyd_10012611 N 0.000
ENSCSAVG00000002570 Ciona savignyi ENSCSAVG00000002570 N 0.000
orange1.1g005863m.g Citrus sinensis orange1.1g005863m.g I 0.000
GLRG_06242 Colletotrichum graminicola GLRG_06242 N 0.000
CGI_10009567 Crassostrea gigas CGI_10009567 N 0.000
CMU_000020 Cryptosporidium muris CMU_000020 N 0.000
CpipJ_CPIJ015450 Culex pipiens CpipJ_CPIJ015450 N 0.000
CPIJ015450 Culex quinquefasciatus CPIJ015450 N 0.000
DILT_0001433701 Diphyllobothrium latum DILT_0001433701 N 0.000
nDi.2.2.2.g12219 Dirofilaria immitis nDi.2.2.2.g12219 N 0.000
ENSETEG00000007628 Echinops telfairi ENSETEG00000007628 I 0.000
ECPE_0000380901 Echinostoma caproni ECPE_0000380901 N 0.000
EMIHUDRAFT_241459 Emiliania huxleyi EMIHUDRAFT_241459 N 0.000
EVEC_0001028401 Enterobius vermicularis EVEC_0001028401 N 0.000
GPLIN_001034800 Globodera pallida GPLIN_001034800 N 0.000
Gorai.003G023300 Gossypium raimondii Gorai.003G023300 N 0.000
HPBE_0002557401 Heligmosomoides bakeri HPBE_0002557401 N 0.000
PHOX2A Homo sapiens ENSG00000165462 D 0.000
ISCW021207 Ixodes scapularis ISCW021207 N 0.000
LotgiG178004 Lottia gigantea LotgiG178004 N 0.000
LCUP014212 Lucilia cuprina LCUP014212 N 0.000
LLOJ003025 Lutzomyia longipalpis LLOJ003025 N 0.000
ENSMMUG00000030441 Macaca mulatta ENSMMUG00000030441 I 0.000
ENSMMUG00000032301 Macaca mulatta ENSMMUG00000032301 I 0.000
MTR_6g007613 Medicago truncatula MTR_6g007613 N 0.000
MTR_3g112300 Medicago truncatula MTR_3g112300 I 0.000
MCINX013555 Melitaea cinxia MCINX013555 N 0.000
MCINX000790 Melitaea cinxia MCINX000790 N 0.000
Minc08600 Meloidogyne incognita Minc08600 N 0.000
MVLG_07150 Microbotryum violaceum MVLG_07150 N 0.000
CTTNBP2NL Monodelphis domestica ENSMODG00000001211 N 0.000
NBR_0001551701 Nippostrongylus brasiliensis NBR_0001551701 N 0.000
SNAPOd2T00000484001 Oikopleura dioica SNAPOd2T00000484001 N 0.000
OBART08G15250 Oryza barthii OBART08G15250 N 0.000
ORGLA08G0133100 Oryza glaberrima ORGLA08G0133100 N 0.000
PEQ_0001057801 Parascaris equorum PEQ_0001057801 N 0.000
PEQ_0000480201 Parascaris equorum PEQ_0000480201 N 0.000
PEQ_0000908401 Parascaris equorum PEQ_0000908401 N 0.000
PEQ_0001303101 Parascaris equorum PEQ_0001303101 N 0.000
ENSPMAG00000009999 Petromyzon marinus ENSPMAG00000009999 N 0.000
ENSPMAG00000010256 Petromyzon marinus ENSPMAG00000010256 N 0.000
ENSPPYG00000005435 Pongo abelii ENSPPYG00000005435 N 0.000
nRc.2.0.1.g13634 Romanomermis culicivorax nRc.2.0.1.g13634 N 0.000
ENSSHAG00000016995 Sarcophilus harrisii ENSSHAG00000016995 N 0.000
SCUD_0000812001 Schistosoma curassoni SCUD_0000812001 N 0.000
A_07772 Schistosoma haematobium A_07772 N 0.000
SMTD_0001546801 Schistosoma mattheei SMTD_0001546801 N 0.000
SROB_0000951501 Schistosoma rodhaini SROB_0000951501 N 0.000
SCLCIDRAFT_1207514 Scleroderma citrinum SCLCIDRAFT_1207514 N 0.000
SINV18611 Solenopsis invicta SINV18611 N 0.000
L889_g12823 Steinernema feltiae L889_g12823 N 0.000
L893_g22533 Steinernema glaseri L893_g22533 N 0.000
L898_g2802 Steinernema monticolum L898_g2802 N 0.000
SVUK_0001098001 Strongylus vulgaris SVUK_0001098001 N 0.000
SVUK_0000323501 Strongylus vulgaris SVUK_0000323501 N 0.000
ENSTRUG00000017521 Takifugu rubripes ENSTRUG00000017521 I 0.000
D917_09995 Trichinella nativa D917_09995 I 0.000
EFV59239 Trichinella spiralis EFV59239 N 0.000
TRE_0000556301 Trichobilharzia regenti TRE_0000556301 N 0.000
TVAG_170510 Trichomonas vaginalis TVAG_170510 N 0.000
lhx5.S Xenopus laevis XB-GENE-865965 I 0.000
lhx3.L Xenopus laevis XB-GENE-865930 I 0.000
hoxa4.S Xenopus laevis XB-GENE-865635 N 0.000
hoxa10.L Xenopus laevis XB-GENE-6486002 I 0.000
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.000
CAA77673 Xenopus laevis CAA77673 I 0.000
AAA85030 Xenopus laevis AAA85030 N 0.000
AAA85027 Xenopus laevis AAA85027 I 0.000
ENSXMAG00000019975 Xiphophorus maculatus ENSXMAG00000019975 N 0.000
L798_12976 Zootermopsis nevadensis L798_12976 N 0.000