scaffold_801641.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 scaffold_801641.1 T005118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF025
M06680_2.00 		Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_col_a 		0.748 0.980
ERF025
M06681_2.00 		Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_colamp_a 		0.748 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_801641.1 AP2 63 113

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ002962 Culex pipiens CpipJ_CPIJ002962 N
CPIJ002962 Culex quinquefasciatus CPIJ002962 N