SELMODRAFT_420500 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_420500 T005171_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.717 0.776
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.717 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ18141 AP2 66 116

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABI4 Arabidopsis lyrata Al_scaffold_0004_2621 I 0.727
ABI4 Arabidopsis thaliana AT2G40220 I 0.727
Bostr.23794s0036 Boechera stricta Bostr.23794s0036 I 0.727
Bo3g034810 Brassica oleracea Bo3g034810 I 0.725
Bo4g025410 Brassica oleracea Bo4g025410 I 0.725
Bra000178 Brassica rapa Bra000178 I 0.725
Bra004978 Brassica rapa Bra004978 I 0.725
Cagra.7053s0005 Capsella grandiflora Cagra.7053s0005 I 0.727
Carubv10025253m.g Capsella rubella Carubv10025253m.g I 0.727
Ca_12465 Cicer arietinum Ca_12465 I 0.718
Cla006708 Citrullus lanatus Cla006708 I 0.715
Ciclev10033578m.g Citrus clementina Ciclev10033578m.g I 0.725
orange1.1g038194m.g Citrus sinensis orange1.1g038194m.g I 0.725
Thhalv10017614m.g Eutrema salsugineum Thhalv10017614m.g I 0.725
gene21003-v1.0-hybrid Fragaria vesca gene21003-v1.0-hybrid I 0.725
GLYMA14G06290 Glycine max GLYMA14G06290 I 0.725
GLYMA02G43240 Glycine max GLYMA02G43240 I 0.725
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.717
Lus10040944.g Linum usitatissimum Lus10040944.g I 0.718
Lus10009834.g Linum usitatissimum Lus10009834.g I 0.718
chr2.CM0002.60.nc Lotus japonicus chr2.CM0002.60.nc I 0.715
MDP0000628484 Malus domestica MDP0000628484 I 0.715
MDP0000225376 Malus domestica MDP0000225376 I 0.725
cassava20838.m1 Manihot esculenta cassava20838.m1 I 0.715
cassava41265.m1 Manihot esculenta cassava41265.m1 I 0.725
MTR_5g082950 Medicago truncatula MTR_5g082950 I 0.715
mgf024416m Mimulus guttatus mgf024416m I 0.722
GSMUA_Achr3G10100_001 Musa acuminata GSMUA_Achr3G10100_001 I 0.713
GSMUA_Achr5G07400_001 Musa acuminata GSMUA_Achr5G07400_001 I 0.713
GSMUA_Achr9G18060_001 Musa acuminata GSMUA_Achr9G18060_001 I 0.713
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.717
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.717
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.717
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.717
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.717
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.717
ABI4 Oryza sativa OS05G0351200 I 0.717
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.717
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.717
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.717
POPTR_0010s19370 Populus trichocarpa POPTR_0010s19370 I 0.738
POPTR_0008s07120 Populus trichocarpa POPTR_0008s07120 I 0.725
Pm018953 Prunus mume Pm018953 I 0.725
PRUPE_ppa015230mg Prunus persica PRUPE_ppa015230mg I 0.725
29814.m000739 Ricinus communis 29814.m000739 I 0.725
SapurV1A.0650s0090 Salix purpurea SapurV1A.0650s0090 I 0.707
SapurV1A.0061s0480 Salix purpurea SapurV1A.0061s0480 I 0.725
SELMODRAFT_427925 Selaginella moellendorffii SELMODRAFT_427925 I 0.841
PGSC0003DMG400041883 Solanum tuberosum PGSC0003DMG400041883 I 0.725
PGSC0003DMG400034739 Solanum tuberosum PGSC0003DMG400034739 I 0.725
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.717
TCM_042471 Theobroma cacao TCM_042471 I 0.725
ABI4 Vitis vinifera VIT_13s0067g01400 I 0.725
abi4 Zea mays GRMZM2G093595 D 0.717