CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Traes_2AL_0B28B6DBE *(Triticum aestivum)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	Traes_2AL_0B28B6DBE	T005754_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF15 M00718_2.00	Arabidopsis thaliana	NGSCGSCB	VGSCGSCN	PBM Chang et al.(2013) pTH7336	0.777	0.837
ERF15 M06604_2.00	Arabidopsis thaliana	NNNHNNHDBMGCCGCCDY	RHGGCGGCKVHDNNDNNN	Dap-seq OMalley et al.(2016) ERF15_colamp_a	0.777	0.837
ERF15 M06605_2.00	Arabidopsis thaliana	NNYHDYMGCCGCCRY	RYGGCGGCKRHDRNN	Dap-seq OMalley et al.(2016) ERF15_col	0.777	0.837
ERF1B M01619_2.00	Arabidopsis thaliana	NMGCCGCCRN	NYGGCGGCKN	PBM Weirauch et al.(2014) pTH8795	0.768	0.816
ERF1B M06626_2.00	Arabidopsis thaliana	NHNNHDYMGCCGCCRYHDNHDNNNNNNN	NNNNNNNHDNHDRYGGCGGCKRHDNNDN	Dap-seq OMalley et al.(2016) ERF1_col_a	0.768	0.816
ERF1B M06627_2.00	Arabidopsis thaliana	MGCCGCCD	HGGCGGCK	Dap-seq OMalley et al.(2016) ERF1_colamp_a	0.768	0.816
ERF1B M09703_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2_01	0.768	0.816
ERF1B M09704_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2	0.768	0.816
Q5Y836_TOBAC M09732_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF5_02	0.739	0.776
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.717	0.735
ERF091 M06638_2.00	Arabidopsis thaliana	NNHNYHDCCGCCGCCRY	RYGGCGGCGGHDRNDNN	Dap-seq OMalley et al.(2016) AT4G18450_col_a	0.714	0.776
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.710	0.755
0100010458 M01644_2.00	Ostreococcus tauri	MGCCGSCR	YGSCGGCK	PBM Weirauch et al.(2014) pTH9447	0.710	0.755
P93392_TOBAC M09731_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$OPBP1_01	0.709	0.857
ERF094 M01602_2.00	Arabidopsis thaliana	VGCCGCCD	HGGCGGCB	PBM Weirauch et al.(2014) pTH8276	0.703	0.776
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.695	0.714
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.695	0.714
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.695	0.714
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.695	0.755
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.695	0.755
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.695	0.755
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.693	0.673
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.693	0.673
ERF095 M06624_2.00	Arabidopsis thaliana	YCDCCGCCGCCRYHD	HDRYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ESE1_col_a	0.692	0.714
ERF095 M06625_2.00	Arabidopsis thaliana	YHNYYDYHDCCGCCGCCDYH	DRHGGCGGCGGHDRHRRNDR	Dap-seq OMalley et al.(2016) ESE1_colamp_a	0.692	0.714
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.687	0.755
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.687	0.755
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.686	0.653
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.685	0.714
ERF4 M01616_2.00	Arabidopsis thaliana	VCGCCGCC	GGCGGCGB	PBM Weirauch et al.(2014) pTH8156	0.683	0.694
ERF4 M06616_2.00	Arabidopsis thaliana	YCDCCGCCGCCRHHD	HDDYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF4_col_a	0.683	0.694
ERF4 M06617_2.00	Arabidopsis thaliana	NHNNHNSCGCCGYCRHHDNN	NNHDDYGRCGGCGSNDNNDN	Dap-seq OMalley et al.(2016) ERF4_colamp_a	0.683	0.694
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.682	0.714
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.682	0.714
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.681	0.694
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.681	0.694
RAP2-3 M01050_2.00	Arabidopsis thaliana	CGCCGCCR	YGGCGGCG	PBM Sullivan et al.(2014) pTH8811	0.681	0.694
RAP2-3 M00847_2.00	Arabidopsis thaliana	NMGCCGCCDN	NHGGCGGCKN	PBM Franco-Zorrilla et al.(2014) RAP2.3	0.681	0.694
Q84J59_MAIZE M09717_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BD1_01	0.680	0.653
ERF2 M01631_2.00	Arabidopsis thaliana	NNNGCCGNCN	NGNCGGCNNN	PBM Weirauch et al.(2014) pTH8113	0.678	0.755
ERF2 M06672_2.00	Arabidopsis thaliana	HHNHHNYHDYCGCCGCCRYND	HNRYGGCGGCGRHDRNDDNDD	Dap-seq OMalley et al.(2016) ERF2_col_a	0.678	0.755
ERF2 M06673_2.00	Arabidopsis thaliana	NNNNNNNHNNHDSMGCCGCCR	YGGCGGCKSHDNNDNNNNNNN	Dap-seq OMalley et al.(2016) ERF2_colamp_a	0.678	0.755
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.678	0.714
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.678	0.714
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.678	0.714
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Traes_2AL_0B28B6DBE.1	AP2	129	181	RAFRGVRKRPWGKFAAEIRDSTRDGVRVWLGTFDSPEEAALAYDQAAFAMRGG

Links
Other AP2 family TFs
Other *Triticum aestivum* TFs

1199 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACRE_047960	Acremonium chrysogenum	ACRE_047960	I
AOL_s00078g183	Arthrobotrys oligospora	AOL_s00078g183	I
BBA_05317	Beauveria bassiana	BBA_05317	I
COCC4DRAFT_131281	Bipolaris maydis	COCC4DRAFT_131281	I
COCMIDRAFT_104594	Bipolaris oryzae	COCMIDRAFT_104594	I
COCSADRAFT_92438	Bipolaris sorokiniana	COCSADRAFT_92438	I
COCVIDRAFT_94490	Bipolaris victoriae	COCVIDRAFT_94490	I
COCCADRAFT_85714	Bipolaris zeicola	COCCADRAFT_85714	I
Bcin05g07400	Botrytis cinerea	Bcin05g07400	D
A1O1_05565	Capronia coronata	A1O1_05565	I
PV04_08029	Capronia semiimmersa	PV04_08029	I
CTHT_0054920	Chaetomium thermophilum	CTHT_0054920	I
G647_02529	Cladophialophora carrionii	G647_02529	I
A1O7_07556	Cladophialophora yegresii	A1O7_07556	I
e_gw1.3.38.1	Cochliobolus heterostrophus C5	e_gw1.3.38.1	I
CFIO01_10853	Colletotrichum fioriniae	CFIO01_10853	I
CGGC5_11802	Colletotrichum gloeosporioides	CGGC5_11802	I
CH063_10117	Colletotrichum higginsianum	CH063_10117	I
Cob_13345	Colletotrichum orbiculare	Cob_13345	I
CSUB01_12250	Colletotrichum sublineola	CSUB01_12250	I
W97_03429	Coniosporium apollinis	W97_03429	I
CCM_07661	Cordyceps militaris	CCM_07661	I
estExt_fgenesh1_pg.C_40812	Cryphonectria parasitica	estExt_fgenesh1_pg.C_40812	I
HMPREF1541_08013	Cyphellophora europaea	HMPREF1541_08013	I
H072_5123	Dactylellina haptotyla	H072_5123	I
DRE_06035	Drechslerella stenobrocha	DRE_06035	I
EV44_g4546	Erysiphe necator	EV44_g4546	I
HMPREF1120_07798	Exophiala dermatitidis	HMPREF1120_07798	I
PV06_09524	Exophiala oligosperma	PV06_09524	I
PV11_08966	Exophiala sideris	PV11_08966	I
PV08_03946	Exophiala spinifera	PV08_03946	I
PV05_10063	Exophiala xenobiotica	PV05_10063	I
FFUJ_04086	Fusarium fujikuroi	FFUJ_04086	I
FGRRES_17192	Fusarium graminearum	FGRRES_17192	I
FOXG_05918	Fusarium oxysporum	FOXG_05918	I
FPSE_09716	Fusarium pseudograminearum	FPSE_09716	I
NechaG31542	Fusarium solani	NechaG31542	I
FVEG_03789	Fusarium verticillioides	FVEG_03789	I
GGTG_00966	Gaeumannomyces graminis	GGTG_00966	I
MPH_00528	Macrophomina phaseolina	MPH_00528	I
MGG_17060	Magnaporthe oryzae	MGG_17060	I
MAPG_07711	Magnaporthe poae	MAPG_07711	I
MBM_03422	Marssonina brunnea	MBM_03422	I
MAC_06599	Metarhizium acridum	MAC_06599	I
MAM_07569	Metarhizium album	MAM_07569	I
MANI_121568	Metarhizium anisopliae	MANI_121568	I
MBR_08632	Metarhizium brunneum	MBR_08632	I
MGU_07934	Metarhizium guizhouense	MGU_07934	I
MAJ_09934	Metarhizium majus	MAJ_09934	I
X797_008205	Metarhizium robertsii	X797_008205	I
MYCTH_2295212	Myceliophthora thermophila	MYCTH_2295212	I
e_gw1.1.1349.1	Nectria haematococca	e_gw1.1.1349.1	I
UCRNP2_4523	Neofusicoccum parvum	UCRNP2_4523	I
NCU02576	Neurospora crassa	NCU02576	D
estExt_fgenesh2_pg.C_20614	Neurospora discreta	estExt_fgenesh2_pg.C_20614	I
NEUTE1DRAFT_73358	Neurospora tetrasperma	NEUTE1DRAFT_73358	I
OIDMADRAFT_43859	Oidiodendron maius	OIDMADRAFT_43859	I
F503_05162	Ophiostoma piceae uamh	F503_05162	I
PFICI_13658	Pestalotiopsis fici	PFICI_13658	I
PODANS_1_8960	Podospora anserina	PODANS_1_8960	I
GMDG_00720	Pseudogymnoascus destructans	GMDG_00720	I
V499_02224	Pseudogymnoascus pannorum	V499_02224	I
PTT_01647	Pyrenophora teres	PTT_01647	I
Z518_09159	Rhinocladiella mackenziei	Z518_09159	I
SAPIO_CDS5525	Scedosporium apiospermum	SAPIO_CDS5525	I
SBOR_8563	Sclerotinia borealis	SBOR_8563	I
SS1G_12158	Sclerotinia sclerotiorum	SS1G_12158	I
SETTUDRAFT_160027	Setosphaeria turcica	SETTUDRAFT_160027	I
SMAC_05786	Sordaria macrospora	SMAC_05786	I
S40288_06487	Stachybotrys chartarum	S40288_06487	I
S40285_06932	Stachybotrys chlorohalonata	S40285_06932	I
THITE_2122040	Thielavia terrestris	THITE_2122040	I
VHEMI03709	Torrubiella hemipterigena	VHEMI03709	I
TRIATDRAFT_323311	Trichoderma atroviride	TRIATDRAFT_323311	I
TRIREDRAFT_108940	Trichoderma reesei	TRIREDRAFT_108940	I
TRIVIDRAFT_85198	Trichoderma virens	TRIVIDRAFT_85198	I
GSTUM_00008737001	Tuber melanosporum	GSTUM_00008737001	I
UV8b_6694	Ustilaginoidea virens	UV8b_6694	I
PV09_04867	Verruconis gallopava	PV09_04867	I
VDBG_03734	Verticillium albo atrum	VDBG_03734	I
VDBG_03734	Verticillium alfalfae	VDBG_03734	I

Traes_2AL_0B28B6DBE (Triticum aestivum) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1199 Related TFs

Traes_2AL_0B28B6DBE **(Triticum aestivum)
AP2**