CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCLIV_044800
(
Neospora caninum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
NCLIV_044800
T006214_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGME49_106620
M01025_2.00
Toxoplasma gondii
NHAGHGYNNN
NNNRCDCTDN
PBM
Radke et al.(2013)
TGME49_306620
0.743
0.906
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_044800
AP2
1020
1072
RAVRGVYFDVTNQAWAANMRVNGKVQKKSFSLKRYGKSARQRAIQARREMERE
Links
Other
AP2
family TFs
Other
Neospora caninum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGME49_106620
Toxoplasma gondii
TGME49_106620
D
0.743