Cla012665 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla012665 T006465_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.785 0.900
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.785 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012665 AP2 15 66

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N
MYB95 Arabidopsis lyrata fgenesh2_kg.2__1707__AT1G74430.1 N
AtMYB47 Arabidopsis thaliana AT1G18710 N
MYB95 Arabidopsis thaliana AT1G74430 N
Bostr.3288s0088 Boechera stricta Bostr.3288s0088 N
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N
Bo5g025730 Brassica oleracea Bo5g025730 N
Bo6g087030 Brassica oleracea Bo6g087030 N
Bo6g118710 Brassica oleracea Bo6g118710 N
Bo6g118730 Brassica oleracea Bo6g118730 N
Bra003801 Brassica rapa Bra003801 N
Bra015911 Brassica rapa Bra015911 N
Bra015912 Brassica rapa Bra015912 N
Bra025678 Brassica rapa Bra025678 N
Carubv10014503m.g Capsella rubella Carubv10014503m.g N
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N