cassava46663.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava46663.m1 T006955_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.690 0.717
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.690 0.717
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava46663.m1 AP2 71 131

Links

Other AP2 family TFs
Other Manihot esculenta TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R009827 Buceros rhinoceros Brh_R009827 I 0.000
CJA14215 Caenorhabditis japonica CJA14215 I 0.000
SSLN_0001714501 Schistocephalus solidus SSLN_0001714501 N 0.000