CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.scaffold_276000039
(
Physcomitrella patens
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
fgenesh1_pg.scaffold_276000039
T007233_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_276000039
AP2
337
387
PRYNGVRWKAKKWTSEIRPTGAKRTVWLGTYNTEEEAASAYDAGIYYYNKP
Links
Other
AP2
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00078g143
Arthrobotrys oligospora
AOL_s00078g143
N
ACLA_052000
Aspergillus clavatus
CADACLAG00004897
N
CADAFLAG00011169
Aspergillus flavus
CADAFLAG00011169
N
CADAORAG00003758
Aspergillus oryzae
CADAORAG00003758
N
PVAR5_8796
Byssochlamys spectabilis
PVAR5_8796
N
A1O3_09274
Capronia epimyces
A1O3_09274
N
PMAA_039750
Penicillium marneffei
PMAA_039750
N
PMAA_039750
Talaromyces marneffei
PMAA_039750
N
TSTA_079030
Talaromyces stipitatus
TSTA_079030
N