Cagra.2418s0007 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.2418s0007 T007765_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.826 0.920
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.826 0.920
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.826 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2418s0007.1.p AP2 13 64

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_019110 Acremonium chrysogenum ACRE_019110 N 0.000
BBA_01981 Beauveria bassiana BBA_01981 N 0.000
COCC4DRAFT_18753 Bipolaris maydis COCC4DRAFT_18753 N 0.000
COCMIDRAFT_38152 Bipolaris oryzae COCMIDRAFT_38152 N 0.000
COCSADRAFT_212000 Bipolaris sorokiniana COCSADRAFT_212000 N 0.000
COCVIDRAFT_32531 Bipolaris victoriae COCVIDRAFT_32531 N 0.000
COCCADRAFT_37755 Bipolaris zeicola COCCADRAFT_37755 N 0.000
Bcin11g03650 Botrytis cinerea Bcin11g03650 N 0.000
A1O1_06542 Capronia coronata A1O1_06542 N 0.000
CPUR_04455 Claviceps purpurea CPUR_04455 N 0.000
estExt_fgenesh1_pg.C_20315 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20315 N 0.000
GLRG_11037 Colletotrichum graminicola GLRG_11037 N 0.000
CH063_02883 Colletotrichum higginsianum CH063_02883 N 0.000
Cob_07468 Colletotrichum orbiculare Cob_07468 N 0.000
CSUB01_03140 Colletotrichum sublineola CSUB01_03140 N 0.000
W97_00259 Coniosporium apollinis W97_00259 N 0.000
estExt_Genewise1Plus.C_30186 Cryphonectria parasitica estExt_Genewise1Plus.C_30186 N 0.000
FFUJ_01093 Fusarium fujikuroi FFUJ_01093 N 0.000
FGRRES_00574 Fusarium graminearum FGRRES_00574 N 0.000
FOXG_00477 Fusarium oxysporum FOXG_00477 N 0.000
FPSE_03135 Fusarium pseudograminearum FPSE_03135 N 0.000
GGTG_05714 Gaeumannomyces graminis GGTG_05714 N 0.000
CMQ_7236 Grosmannia clavigera CMQ_7236 N 0.000
LEMA_P037470.1 Leptosphaeria maculans LEMA_P037470.1 N 0.000
MGG_10528 Magnaporthe oryzae MGG_10528 N 0.000
MBM_09637 Marssonina brunnea MBM_09637 N 0.000
MAC_03038 Metarhizium acridum MAC_03038 N 0.000
MAM_01897 Metarhizium album MAM_01897 N 0.000
MANI_001311 Metarhizium anisopliae MANI_001311 N 0.000
MBR_03402 Metarhizium brunneum MBR_03402 N 0.000
MAJ_00705 Metarhizium majus MAJ_00705 N 0.000
X797_003963 Metarhizium robertsii X797_003963 N 0.000
MYCTH_2299532 Myceliophthora thermophila MYCTH_2299532 N 0.000
OIDMADRAFT_53431 Oidiodendron maius OIDMADRAFT_53431 N 0.000
F503_05665 Ophiostoma piceae uamh F503_05665 N 0.000
PFICI_01056 Pestalotiopsis fici PFICI_01056 N 0.000
SNOG_08898 Phaeosphaeria nodorum SNOG_08898 N 0.000
GMDG_00381 Pseudogymnoascus destructans GMDG_00381 N 0.000
V499_05641 Pseudogymnoascus pannorum V499_05641 N 0.000
PTT_13565 Pyrenophora teres PTT_13565 N 0.000
SETTUDRAFT_66917 Setosphaeria turcica SETTUDRAFT_66917 N 0.000
SPBR_02702 Sporothrix brasiliensis SPBR_02702 N 0.000
HMPREF1624_02645 Sporothrix schenckii HMPREF1624_02645 N 0.000
S40285_00671 Stachybotrys chlorohalonata S40285_00671 N 0.000
VHEMI06241 Torrubiella hemipterigena VHEMI06241 N 0.000
UV8b_4792 Ustilaginoidea virens UV8b_4792 N 0.000
PV09_06680 Verruconis gallopava PV09_06680 N 0.000
VDAG_03482 Verticillium dahliae VDAG_03482 N 0.000