Ciclev10009593m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10009593m.g T007987_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.857 0.980
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.857 0.980
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10009593m AP2 6 57

Links

Other AP2 family TFs
Other Citrus clementina TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00076g415 Arthrobotrys oligospora AOL_s00076g415 I
ARB_05109 Arthroderma benhamiae ARB_05109 I
M437DRAFT_59053 Aureobasidium melanogenum M437DRAFT_59053 N
M438DRAFT_299670 Aureobasidium pullulans M438DRAFT_299670 N
AUEXF2481DRAFT_112381 Aureobasidium subglaciale AUEXF2481DRAFT_112381 N
BAUCODRAFT_29699 Baudoinia compniacensis BAUCODRAFT_29699 N
COCMIDRAFT_32511 Bipolaris oryzae COCMIDRAFT_32511 N
COCSADRAFT_201838 Bipolaris sorokiniana COCSADRAFT_201838 N
COCVIDRAFT_104413 Bipolaris victoriae COCVIDRAFT_104413 N
COCCADRAFT_22830 Bipolaris zeicola COCCADRAFT_22830 N
A1O3_02831 Capronia epimyces A1O3_02831 N
estExt_Genewise1.C_60195 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60195 N
W97_00606 Coniosporium apollinis W97_00606 N
H072_5429 Dactylellina haptotyla H072_5429 I
DOTSEDRAFT_67989 Dothistroma septosporum DOTSEDRAFT_67989 N
DRE_06459 Drechslerella stenobrocha DRE_06459 I
EPUS_02316 Endocarpon pusillum EPUS_02316 N
LEMA_P051420.1 Leptosphaeria maculans LEMA_P051420.1 N
MPH_03457 Macrophomina phaseolina MPH_03457 N
MGYG_08173 Microsporum gypseum MGYG_08173 I
estExt_Genewise1.C_12121 Mycosphaerella fijiensis estExt_Genewise1.C_12121 N
gw1.1.2094.1 Mycosphaerella graminicola gw1.1.2094.1 N
UCRNP2_1954 Neofusicoccum parvum UCRNP2_1954 N
MYCFIDRAFT_95483 Pseudocercospora fijiensis MYCFIDRAFT_95483 N
GMDG_05434 Pseudogymnoascus destructans GMDG_05434 N
V499_09210 Pseudogymnoascus pannorum V499_09210 N
PTRG_00830 Pyrenophora triticirepentis PTRG_00830 N
SETTUDRAFT_181417 Setosphaeria turcica SETTUDRAFT_181417 N
SEPMUDRAFT_145995 Sphaerulina musiva SEPMUDRAFT_145995 N
SNOG_07131 Stagonospora nodorum SNOG_07131 N
TEQG_02389 Trichophyton equinum TEQG_02389 I
H101_02474 Trichophyton interdigitale H101_02474 I
H102_05466 Trichophyton rubrum H102_05466 I
H105_05509 Trichophyton soudanense H105_05509 I
TRV_07860 Trichophyton verrucosum TRV_07860 I
GSTUM_00012254001 Tuber melanosporum GSTUM_00012254001 I
PV09_02303 Verruconis gallopava PV09_02303 N
Mycgr3G20893 Zymoseptoria tritici Mycgr3G20893 N