Eucgr.A02825 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02825 T008103_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.692 0.860
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.692 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02825.1 AP2 24 75

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_080260 Acremonium chrysogenum ACRE_080260 N
ANIA_09050 Aspergillus nidulans CADANIAG00007803 N
COCC4DRAFT_153628 Bipolaris maydis COCC4DRAFT_153628 N
COCSADRAFT_222162 Bipolaris sorokiniana COCSADRAFT_222162 N
COCVIDRAFT_99703 Bipolaris victoriae COCVIDRAFT_99703 N
COCCADRAFT_88055 Bipolaris zeicola COCCADRAFT_88055 N
PVAR5_8873 Byssochlamys spectabilis PVAR5_8873 N
A1O1_07586 Capronia coronata A1O1_07586 N
FPSE_08824 Fusarium pseudograminearum FPSE_08824 N
NechaG80102 Fusarium solani NechaG80102 N
NechaG80151 Fusarium solani NechaG80151 N
MGG_00096 Magnaporthe oryzae MGG_00096 N
fgenesh1_pg.sca_12_chr5_2_0000331 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000331 N
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N
OIDMADRAFT_45112 Oidiodendron maius OIDMADRAFT_45112 N
Pc13g06530 Penicillium chrysogenum Pc13g06530 N
PEX1_099950 Penicillium expansum PEX1_099950 N
PITC_065540 Penicillium italicum PITC_065540 N
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N
U727_00430311331 Penicillium solitum U727_00430311331 N
V499_04467 Pseudogymnoascus pannorum V499_04467 N
V499_06431 Pseudogymnoascus pannorum V499_06431 N
TRIVIDRAFT_149245 Trichoderma virens TRIVIDRAFT_149245 N
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N
PV09_04169 Verruconis gallopava PV09_04169 N
VDAG_10012 Verticillium dahliae VDAG_10012 N