Eucgr.K02780 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.K02780 T008236_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.754 0.740
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.750 0.840
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.750 0.840
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.741 0.840
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.741 0.840
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.741 0.840
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.736 0.780
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.736 0.780
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.736 0.780
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.736 0.780
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.730 0.780
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.727 0.860
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.725 0.760
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.695 0.800
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.695 0.800
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.695 0.800
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.695 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02780.1 AP2 101 152
Eucgr.K02780.2 AP2 100 151

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

499 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin108472 Clonorchis sinensis csin108472 I
DILT_0001805701 Diphyllobothrium latum DILT_0001805701 I
ECANG7_00782 Echinococcus canadensis ECANG7_00782 I
EmuJ_000893400 Echinococcus multilocularis EmuJ_000893400 I
ECPE_0001501301 Echinostoma caproni ECPE_0001501301 N
D915_07772 Fasciola hepatica D915_07772 N
TTAC_0000691201 Hydatigera taeniaeformis TTAC_0000691201 I
HDID_0000526701 Hymenolepis diminuta HDID_0000526701 I
HmN_000026900 Hymenolepis microstoma HmN_000026900 I
HNAJ_0000459401 Hymenolepis nana HNAJ_0000459401 I
ENSMEUG00000006332 Macropus eugenii ENSMEUG00000006332 I
T265_03875 Opisthorchis viverrini T265_03875 I
PXEA_0002306401 Protopolystoma xenopodis PXEA_0002306401 I
SCUD_0001186201 Schistosoma curassoni SCUD_0001186201 I
Sjc_0096440 Schistosoma japonicum Sjc_0096440 N
TASK_0000487901 Taenia asiatica TASK_0000487901 I
TsM_000653100 Taenia solium TsM_000653100 I