CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G188300
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.001G188300
T008477_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G188300.1
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.2
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.3
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.4
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.5
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.6
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000007349
Ailuropoda melanoleuca
ENSAMEG00000007349
N
ZNF606
Bos taurus
ENSBTAG00000003456
N
ZNF606
Callithrix jacchus
ENSCJAG00000000374
N
ZNF606
Canis familiaris
ENSCAFG00000029776
N
ENSCSAG00000001613
Chlorocebus sabaeus
ENSCSAG00000001613
N
ZNF606
Choloepus hoffmanni
ENSCHOG00000005074
N
ENSDORG00000009776
Dipodomys ordii
ENSDORG00000009776
N
ZNF606
Echinops telfairi
ENSETEG00000014446
N
ZNF606
Equus caballus
ENSECAG00000001316
N
ZNF606
Gorilla gorilla
ENSGGOG00000010665
N
ZNF606
Homo sapiens
ENSG00000166704
N
ENSSTOG00000025545
Ictidomys tridecemlineatus
ENSSTOG00000025545
N
ZNF606
Loxodonta africana
ENSLAFG00000008695
N
ENSP00000343617
Macaca fascicularis
ENSP00000343617
N
ZNF606
Microcebus murinus
ENSMICG00000005012
N
Zfp606
Mus musculus
ENSMUSG00000030386
N
ENSNLEG00000011055
Nomascus leucogenys
ENSNLEG00000011055
N
ZNF606
Otolemur garnettii
ENSOGAG00000009299
N
ZNF606
Pan troglodytes
ENSPTRG00000011575
N
ENSPANG00000010429
Papio anubis
ENSPANG00000010429
N
ENSPPYG00000010488
Pongo abelii
ENSPPYG00000010488
N
ENSPCAG00000000009
Procavia capensis
ENSPCAG00000000009
N
Zfp606
Rattus norvegicus
ENSRNOG00000019127
N
ZNF606
Sus scrofa
ENSSSCG00000003995
N
ZNF606
Tursiops truncatus
ENSTTRG00000017225
N