Gorai.007G240700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.007G240700 T008594_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.796 0.940
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.777 0.900
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.777 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G240700.1 AP2 148 199

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG220448 Capitella teleta CapteG220448 I 0.000
HelroG62031 Helobdella robusta HelroG62031 N 0.000
XP_002159148.1 Hydra magnipapillata XP_002159148.1 I 0.000
NEMVEDRAFT_v1g81183 Nematostella vectensis NEMVEDRAFT_v1g81183 I 0.000
e_gw.4.260.1_CONSTRUCT PBM CONSTRUCTS e_gw.4.260.1_CONSTRUCT D 0.000
ENSPMAG00000009067 Petromyzon marinus ENSPMAG00000009067 I 0.000
RPRC013496 Rhodnius prolixus RPRC013496 N 0.000
SINV22144 Solenopsis invicta SINV22144 I 0.000