Gorai.008G116800 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.008G116800 T008613_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.724 0.745
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.724 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G116800.1 AP2 33 84

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aqu1.223280 Amphimedon queenslandica Aqu1.223280 N
ENSCING00000018982 Ciona intestinalis ENSCING00000018982 I
ENSCSAVG00000003120 Ciona savignyi ENSCSAVG00000003120 I
Yy2 Dipodomys ordii ENSDORG00000011068 N
ECANG7_04162 Echinococcus canadensis ECANG7_04162 N
EmuJ_000526400 Echinococcus multilocularis EmuJ_000526400 N
HmN_000055100 Hymenolepis microstoma HmN_000055100 N
MCOS_0000059401 Mesocestoides corti MCOS_0000059401 N
SSLN_0001111501 Schistocephalus solidus SSLN_0001111501 N
A_04912 Schistosoma haematobium A_04912 N
Smp_164190 Schistosoma mansoni Smp_164190 N
SMTD_0001228301 Schistosoma mattheei SMTD_0001228301 N
TsM_001027300 Taenia solium TsM_001027300 N