Lus10019455.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10019455.g T008827_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.690 0.900
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.690 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10019455 AP2 54 105

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002645 Ailuropoda melanoleuca ENSAMEG00000002645 I 0.000
ENSAPLG00000011422 Anas platyrhynchos ENSAPLG00000011422 I 0.000
ENSACAG00000005519 Anolis carolinensis ENSACAG00000005519 I 0.000
Afo_R013608 Aptenodytes forsteri Afo_R013608 I 0.000
ENSBTAP00000005489-D1 Bos grunniens ENSBTAP00000005489-D1 I 0.000
VEZF1 Bos taurus ENSBTAG00000004193 I 0.000
Brh_R008815 Buceros rhinoceros Brh_R008815 I 0.000
VEZF1 Callithrix jacchus ENSCJAG00000014022 I 0.000
Aan_R014132 Calypte anna Aan_R014132 I 0.000
VEZF1 Canis familiaris ENSCAFG00000017426 I 0.000
VEZF1 Cavia porcellus ENSCPOG00000002637 I 0.000
ENSCSAG00000005638 Chlorocebus sabaeus ENSCSAG00000005638 I 0.000
VEZF1 Choloepus hoffmanni ENSCHOG00000007280 I 0.000
VEZF1 Dasypus novemcinctus ENSDNOG00000034294 I 0.000
VEZF1 Equus caballus ENSECAG00000016083 I 0.000
VEZF1 Erinaceus europaeus ENSEEUG00000009273 I 0.000
VEZF1 Felis catus ENSFCAG00000004551 I 0.000
ENSFALG00000005040 Ficedula albicollis ENSFALG00000005040 I 0.000
VEZF1 Gallus gallus ENSGALG00000005530 I 0.000
Gfo_R012754 Geospiza fortis Gfo_R012754 I 0.000
VEZF1 Gorilla gorilla ENSGGOG00000004387 I 0.000
VEZF1 Homo sapiens ENSG00000136451 D 0.000
ENSSTOG00000000239 Ictidomys tridecemlineatus ENSSTOG00000000239 I 0.000
VEZF1 Loxodonta africana ENSLAFG00000029087 I 0.000
ENSMMUP00000006278 Macaca fascicularis ENSMMUP00000006278 I 0.000
VEZF1 Macaca mulatta ENSMMUG00000004723 I 0.000
VEZF1 Meleagris gallopavo ENSMGAG00000008207 I 0.000
VEZF1 Microcebus murinus ENSMICG00000016243 I 0.000
VEZF1 Monodelphis domestica ENSMODG00000014778 I 0.000
ENSMPUG00000015370 Mustela putorius furo ENSMPUG00000015370 I 0.000
Vezf1 Mus musculus ENSMUSG00000018377 I 0.000
ENSMUSG00000098546 Mus musculus ENSMUSG00000098546 I 0.000
Myotis_brandtii_VEZF1_10020669 Myotis brandtii Myotis_brandtii_VEZF1_10020669 I 0.000
VEZF1 Myotis lucifugus ENSMLUG00000011019 I 0.000
ENSNLEG00000008084 Nomascus leucogenys ENSNLEG00000008084 I 0.000
VEZF1 Ochotona princeps ENSOPRG00000000899 I 0.000
VEZF1 Ornithorhynchus anatinus ENSOANG00000007321 I 0.000
VEZF1 Oryctolagus cuniculus ENSOCUG00000017673 I 0.000
VEZF1 Otolemur garnettii ENSOGAG00000014483 I 0.000
ENSOARG00000008213 Ovis aries ENSOARG00000008213 I 0.000
VEZF1 Pan troglodytes ENSPTRG00000009442 I 0.000
ENSPSIG00000008918 Pelodiscus sinensis ENSPSIG00000008918 I 0.000
VEZF1 Procavia capensis ENSPCAG00000005140 I 0.000
VEZF1 Pteropus vampyrus ENSPVAG00000000518 I 0.000
Vezf1 Rattus norvegicus ENSRNOG00000009819 I 0.000
ENSSHAG00000003506 Sarcophilus harrisii ENSSHAG00000003506 I 0.000
ENSSSCG00000025930 Sus scrofa ENSSSCG00000025930 I 0.000
VEZF1 Sus scrofa ENSSSCG00000017623 I 0.000
ENSTGUG00000008421 Taeniopygia guttata ENSTGUG00000008421 I 0.000
ENSTGUG00000015998 Taeniopygia guttata ENSTGUG00000015998 I 0.000
VEZF1 Tupaia belangeri ENSTBEG00000015173 I 0.000
VEZF1 Tursiops truncatus ENSTTRG00000007309 I 0.000
Tal_R013318 Tyto alba Tal_R013318 I 0.000
vezf1.S Xenopus laevis XB-GENE-481527 I 0.000
vezf1.L Xenopus laevis XB-GENE-6256471 I 0.000
vezf1 Xenopus tropicalis XB-GENE-481523 I 0.000