MDP0000172804 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000172804 T008994_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.685 0.922
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.685 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000172804 AP2 28 79

Links

Other AP2 family TFs
Other Malus domestica TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02122 Aegilops tauschii F775_02122 I
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I
WRKY55 Arabidopsis thaliana AT2G40740 D
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I
Bostr.20505s0113 Boechera stricta Bostr.20505s0113 I
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I
Bo4g114050 Brassica oleracea Bo4g114050 I
Bo3g035130 Brassica oleracea Bo3g035130 I
Bo6g066790 Brassica oleracea Bo6g066790 I
Bo4g190390 Brassica oleracea Bo4g190390 I
Bo4g190380 Brassica oleracea Bo4g190380 I
Bra014693 Brassica rapa Bra014693 I
Bra016974 Brassica rapa Bra016974 I
Bra016975 Brassica rapa Bra016975 I
Bra013732 Brassica rapa Bra013732 I
Bra000202 Brassica rapa Bra000202 I
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I
Carubv10023773m.g Capsella rubella Carubv10023773m.g I
Carubv10017859m.g Capsella rubella Carubv10017859m.g I
evm.TU.supercontig_19.45 Carica papaya evm.TU.supercontig_19.45 I
Cla007423 Citrullus lanatus Cla007423 I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
Cucsa.143840 Cucumis sativus Cucsa.143840 I
Cucsa.078810 Cucumis sativus Cucsa.078810 I
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I
Eucgr.J02653 Eucalyptus grandis Eucgr.J02653 I
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I
GLYMA04G40121 Glycine max GLYMA04G40121 I
GLYMA06G14731 Glycine max GLYMA06G14731 I
GLYMA09G41050 Glycine max GLYMA09G41050 I
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I
LPERR05G09170 Leersia perrieri LPERR05G09170 I
LPERR03G14340 Leersia perrieri LPERR03G14340 I
Lus10029022.g Linum usitatissimum Lus10029022.g I
MDP0000828055 Malus domestica MDP0000828055 I
MDP0000460139 Malus domestica MDP0000460139 I
cassava8741.m1 Manihot esculenta cassava8741.m1 I
cassava26362.m1 Manihot esculenta cassava26362.m1 I
mgf026576m Mimulus guttatus mgf026576m I
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I
GSMUA_Achr3G25080_001 Musa acuminata GSMUA_Achr3G25080_001 I
OBART05G11690 Oryza barthii OBART05G11690 I
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I
BGIOSGA019620 Oryza indica BGIOSGA019620 I
OLONG_021880 Oryza longistaminata OLONG_021880 I
OMERI05G10350 Oryza meridionalis OMERI05G10350 I
ONIVA05G12080 Oryza nivara ONIVA05G12080 I
OPUNC05G10010 Oryza punctata OPUNC05G10010 I
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I
OS05G0321900 Oryza sativa OS05G0321900 I
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I
POPTR_0019s08730 Populus trichocarpa POPTR_0019s08730 I
Pm019076 Prunus mume Pm019076 I
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I
29729.m002370 Ricinus communis 29729.m002370 I
29729.m002330 Ricinus communis 29729.m002330 I
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I
Si025307m.g Setaria italica Si025307m.g I
Solyc06g048870.1 Solanum lycopersicum Solyc06g048870.1 I
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I
Sb02g011050 Sorghum bicolor Sb02g011050 I
TCM_045555 Theobroma cacao TCM_045555 I
Traes_6AS_68775100B Triticum aestivum Traes_6AS_68775100B I
TRIUR3_24602 Triticum urartu TRIUR3_24602 I
WRKY55 Vitis vinifera VIT_13s0067g03130 I
GRMZM2G127064 Zea mays GRMZM2G127064 I