Pavir.Aa00475 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Aa00475 T009321_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00475.1.p AP2 178 248
Pavir.Aa00475.1.p AP2 290 342
Pavir.Aa00475.2.p AP2 178 238
Pavir.Aa00475.2.p AP2 280 332

Links

Other AP2 family TFs
Other Panicum virgatum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I
ZAT11 Arabidopsis thaliana AT2G37430 I
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I
Bo4g030570 Brassica oleracea Bo4g030570 I
Bo4g186920 Brassica oleracea Bo4g186920 I
Bra005197 Brassica rapa Bra005197 I
Bra017188 Brassica rapa Bra017188 I
Bra039806 Brassica rapa Bra039806 I
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I
Carubv10024141m.g Capsella rubella Carubv10024141m.g I
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I
Cla004091 Citrullus lanatus Cla004091 I
Cla018516 Citrullus lanatus Cla018516 I
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I
Cucsa.065930 Cucumis sativus Cucsa.065930 I
Cucsa.165460 Cucumis sativus Cucsa.165460 I
Eucgr.A01230 Eucalyptus grandis Eucgr.A01230 I
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I
Eucgr.A01233 Eucalyptus grandis Eucgr.A01233 I
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I
GLYMA02G10490 Glycine max GLYMA02G10490 I
GLYMA03G33050 Glycine max GLYMA03G33050 I
GLYMA03G33060 Glycine max GLYMA03G33060 I
GLYMA03G33070 Glycine max GLYMA03G33070 I
GLYMA10G05210 Glycine max GLYMA10G05210 I
GLYMA10G43630 Glycine max GLYMA10G43630 I
GLYMA13G19570 Glycine max GLYMA13G19570 I
GLYMA18G52410 Glycine max GLYMA18G52410 I
GLYMA19G35740 Glycine max GLYMA19G35740 I
GLYMA19G35770 Glycine max GLYMA19G35770 I
GLYMA20G23180 Glycine max GLYMA20G23180 I
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I
LPERR01G31460 Leersia perrieri LPERR01G31460 I
LPERR01G31500 Leersia perrieri LPERR01G31500 I
Lus10024428.g Linum usitatissimum Lus10024428.g I
Lus10030330.g Linum usitatissimum Lus10030330.g I
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I
MDP0000137826 Malus domestica MDP0000137826 I
MDP0000257423 Malus domestica MDP0000257423 I
cassava35212.m1 Manihot esculenta cassava35212.m1 I
cassava39064.m1 Manihot esculenta cassava39064.m1 I
cassava8924.m1 Manihot esculenta cassava8924.m1 I
cassava9455.m1 Manihot esculenta cassava9455.m1 I
MTR_7g023560 Medicago truncatula MTR_7g023560 I
MTR_7g100100 Medicago truncatula MTR_7g100100 I
mgf023249m Mimulus guttatus mgf023249m I
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I
GSMUA_Achr1G03310_001 Musa acuminata GSMUA_Achr1G03310_001 I
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I
BGIOSGA000523 Oryza indica BGIOSGA000523 I
BGIOSGA004768 Oryza indica BGIOSGA004768 I
OMERI01G33680 Oryza meridionalis OMERI01G33680 I
OMERI01G33710 Oryza meridionalis OMERI01G33710 I
ONIVA01G41600 Oryza nivara ONIVA01G41600 I
ONIVA01G41740 Oryza nivara ONIVA01G41740 I
OPUNC01G35440 Oryza punctata OPUNC01G35440 I
OPUNC01G35470 Oryza punctata OPUNC01G35470 I
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I
OS01G0838600 Oryza sativa OS01G0838600 I
OS01G0839100 Oryza sativa OS01G0839100 I
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I
Pavir.J04850 Panicum virgatum Pavir.J04850 I
Pavir.J14338 Panicum virgatum Pavir.J14338 I
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I
Pm002762 Prunus mume Pm002762 I
Pm018761 Prunus mume Pm018761 I
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I
28637.m000203 Ricinus communis 28637.m000203 I
29585.m000611 Ricinus communis 29585.m000611 I
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I
Si003051m.g Setaria italica Si003051m.g I
Si008395m.g Setaria italica Si008395m.g I
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I
PGSC0003DMG400030311 Solanum tuberosum PGSC0003DMG400030311 I
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I
Sb03g039270 Sorghum bicolor Sb03g039270 I
Sb10g031270 Sorghum bicolor Sb10g031270 I
TCM_022001 Theobroma cacao TCM_022001 I
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I
GRMZM2G112799 Zea mays GRMZM2G112799 I
GRMZM2G307402 Zea mays GRMZM2G307402 I
GRMZM2G376061 Zea mays GRMZM2G376061 I
GRMZM5G804618 Zea mays GRMZM5G804618 I