Pavir.Da02059 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Da02059 T009408_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.852 0.961
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.852 0.961
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.722 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da02059.1.p AP2 6 57

Links

Other AP2 family TFs
Other Panicum virgatum TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001652 Aedes aegypti AAEL001652 N
AALB001157 Anopheles albimanus AALB001157 N
AARA012021 Anopheles arabiensis AARA012021 N
AARA012018 Anopheles arabiensis AARA012018 N
AATE016471 Anopheles atroparvus AATE016471 N
AATE014155 Anopheles atroparvus AATE014155 N
ACHR003205 Anopheles christyi ACHR003205 N
ACHR000531 Anopheles christyi ACHR000531 N
ACOM030952 Anopheles coluzzii ACOM030952 N
ACOM030968 Anopheles coluzzii ACOM030968 N
ACUA013501 Anopheles culicifacies ACUA013501 N
ACUA001624 Anopheles culicifacies ACUA001624 N
ADAC000872 Anopheles darlingi ADAC000872 N
ADIR000749 Anopheles dirus ADIR000749 N
ADIR000747 Anopheles dirus ADIR000747 N
AEPI000391 Anopheles epiroticus AEPI000391 N
AEPI000388 Anopheles epiroticus AEPI000388 N
AFAF015377 Anopheles farauti AFAF015377 N
AFAF016537 Anopheles farauti AFAF016537 N
AFUN010327 Anopheles funestus AFUN010327 N
AFUN010324 Anopheles funestus AFUN010324 N
AGAP007824 Anopheles gambiae AGAP007824 N
AGAP007822 Anopheles gambiae AGAP007822 N
AMAM001181 Anopheles maculatus AMAM001181 N
AMAM021192 Anopheles maculatus AMAM021192 N
AMEC002017 Anopheles melas AMEC002017 N
AMEC011119 Anopheles melas AMEC011119 N
AMEM007634 Anopheles merus AMEM007634 N
AMEM014363 Anopheles merus AMEM014363 N
AMIN006409 Anopheles minimus AMIN006409 N
AMIN006412 Anopheles minimus AMIN006412 N
AQUA003680 Anopheles quadriannulatus AQUA003680 N
AQUA014420 Anopheles quadriannulatus AQUA014420 N
ASIS001250 Anopheles sinensis ASIS001250 N
ASTEI01637 Anopheles stephensi ASTEI01637 N
GB41320 Apis mellifera GB41320 N
ACEP11448 Atta cephalotes ACEP11448 N
Cflo_10835--XP_001121050.1_APIME Camponotus floridanus Cflo_10835--XP_001121050.1_APIME N
CpipJ_CPIJ000953 Culex pipiens CpipJ_CPIJ000953 N
CPIJ000953 Culex quinquefasciatus CPIJ000953 N
DAPPUDRAFT_45040 Daphnia pulex DAPPUDRAFT_45040 N
YQE_07457 Dendroctonus ponderosae YQE_07457 N
Hsal_11851--XP_001121050.1_APIME Harpegnathos saltator Hsal_11851--XP_001121050.1_APIME N
ISCW003677 Ixodes scapularis ISCW003677 N
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N
RPRC009805 Rhodnius prolixus RPRC009805 N
SINV12291 Solenopsis invicta SINV12291 N
TC003170 Tribolium castaneum TC003170 N
L798_14385 Zootermopsis nevadensis L798_14385 N