Pavir.Fb00452 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Fb00452 T009446_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb00452.1.p AP2 31 82

Links

Other AP2 family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00010p00240320 Amborella trichopoda AMTR_s00010p00240320 I 0.689
Thhalv10009328m.g Eutrema salsugineum Thhalv10009328m.g I 0.677
GLYMA13G28810 Glycine max GLYMA13G28810 I 0.689
GLYMA15G10245 Glycine max GLYMA15G10245 I 0.689
LPERR08G04370 Leersia perrieri LPERR08G04370 I 0.685
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.683
MDP0000668122 Malus domestica MDP0000668122 I 0.678
ORGLA08G0039300 Oryza glaberrima ORGLA08G0039300 I 0.685
OGLUM08G04690 Oryza glumaepatula OGLUM08G04690 I 0.685
BGIOSGA027571 Oryza indica BGIOSGA027571 I 0.685
ONIVA08G04340 Oryza nivara ONIVA08G04340 I 0.685
OPUNC08G04370 Oryza punctata OPUNC08G04370 I 0.685
ORUFI08G04980 Oryza rufipogon ORUFI08G04980 I 0.685
OS08G0173700 Oryza sativa OS08G0173700 I 0.685
Si015237m.g Setaria italica Si015237m.g I 0.743
Si032815m.g Setaria italica Si032815m.g I 0.684
Sb07g004655 Sorghum bicolor Sb07g004655 I 0.744
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.687
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.681
GRMZM2G055070 Zea mays GRMZM2G055070 I 0.733
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.677