CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J19507
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J19507
T009588_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J19507.1.p
AP2
88
148
SRFRGVSRHRWTGRFEAHLWDKATWNPTQKKKGKQVYLGAYNEEDAAARAYDLAALKYWGP
Pavir.J19507.1.p
AP2
190
242
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGI
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
293 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa015420mg
Prunus persica
PRUPE_ppa015420mg
N
PRUPE_ppa016010mg
Prunus persica
PRUPE_ppa016010mg
N
PRUPE_ppa016227m1g
Prunus persica
PRUPE_ppa016227m1g
N
PRUPE_ppa018763mg
Prunus persica
PRUPE_ppa018763mg
N
PRUPE_ppa018881mg
Prunus persica
PRUPE_ppa018881mg
N
PRUPE_ppa024136mg
Prunus persica
PRUPE_ppa024136mg
N
PRUPE_ppa024297mg
Prunus persica
PRUPE_ppa024297mg
N
PRUPE_ppa025795mg
Prunus persica
PRUPE_ppa025795mg
N