SapurV1A.0237s0310 (Salix purpurea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 SapurV1A.0237s0310 T009742_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.770 0.820
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.763 0.820
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.763 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0237s0310.1.p AP2 105 156

Links

Other AP2 family TFs
Other Salix purpurea TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G45320 Brachypodium distachyon BRADI1G45320 N
MLOC_68932 Hordeum vulgare MLOC_68932 N
OBART06G07940 Oryza barthii OBART06G07940 N
OB06G17650 Oryza brachyantha OB06G17650 N
ORGLA06G0075400 Oryza glaberrima ORGLA06G0075400 N
OGLUM06G08460 Oryza glumaepatula OGLUM06G08460 N
OLONG_016401 Oryza longistaminata OLONG_016401 N
OPUNC06G07700 Oryza punctata OPUNC06G07700 N
ORUFI06G08240 Oryza rufipogon ORUFI06G08240 N
OS06G0225100 Oryza sativa OS06G0225100 N
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N
Traes_7DS_5B1210681 Triticum aestivum Traes_7DS_5B1210681 N
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N
GRMZM2G060114 Zea mays GRMZM2G060114 N